FFCP PHASE1:Hg19::chr3:196987309..196987350,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1739 | |EntrezGene=1739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2900 | |HGNC=2900 | ||
|TSSclassifier=strong | |||
|UniProt=C9IYP1 | |UniProt=C9IYP1 | ||
|association_with_transcript=0bp_to_ENST00000453607_5end | |association_with_transcript=0bp_to_ENST00000453607_5end | ||
|cluster_id=chr3:196987309..196987350,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_12_at_DLG1_5end | |description=CAGE_peak_12_at_DLG1_5end | ||
|id=chr3:196987309..196987350,- | |id=chr3:196987309..196987350,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.01e-17;3!UBERON:0006601;7.37e-16;82!UBERON:0010122;2.29e-13;2!UBERON:0006222;2.16e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.22e-86!57;UBERON:0005068!1.22e-86!57;UBERON:0006241!1.22e-86!57;UBERON:0007135!1.22e-86!57;UBERON:0002616!2.33e-83!59;UBERON:0000955!6.27e-83!69;UBERON:0006238!6.27e-83!69;UBERON:0002780!2.09e-76!41;UBERON:0001890!2.09e-76!41;UBERON:0006240!2.09e-76!41;UBERON:0001017!9.98e-75!82;UBERON:0003080!2.12e-74!42;UBERON:0005743!7.37e-74!86;UBERON:0001893!8.47e-72!34;UBERON:0002020!1.31e-71!34;UBERON:0003528!1.31e-71!34;UBERON:0002791!5.55e-69!33;UBERON:0001869!3.62e-67!32;UBERON:0000073!8.30e-66!94;UBERON:0001016!8.30e-66!94;UBERON:0003075!3.00e-65!86;UBERON:0007284!3.00e-65!86;UBERON:0002346!1.14e-64!90;UBERON:0003056!1.28e-54!61;UBERON:0001950!3.31e-54!20;UBERON:0002619!3.95e-54!22;UBERON:0000033!4.86e-48!123;UBERON:0000956!3.55e-47!25;UBERON:0000203!3.55e-47!25;UBERON:0007023!1.37e-46!115;UBERON:0000153!2.99e-45!129;UBERON:0007811!2.99e-45!129;UBERON:0000924!1.21e-36!173;UBERON:0006601!1.21e-36!173;UBERON:0004121!3.69e-36!169;UBERON:0002420!5.47e-27!9;UBERON:0007245!5.47e-27!9;UBERON:0010009!5.47e-27!9;UBERON:0010011!5.47e-27!9;UBERON:0000454!5.47e-27!9;UBERON:0002308!5.06e-26!9;UBERON:0000125!5.06e-26!9;UBERON:0000025!1.10e-24!194;UBERON:0009663!2.39e-21!7;UBERON:0000200!1.48e-18!6;UBERON:0001871!2.19e-18!7;UBERON:0004733!6.53e-18!12;UBERON:0002028!6.53e-18!12;UBERON:0007277!6.53e-18!12;UBERON:0004111!1.70e-17!241;UBERON:0004732!2.14e-16!13;UBERON:0002298!4.44e-16!8;UBERON:0000064!5.28e-16!219;UBERON:0002021!1.92e-15!5;UBERON:0000477!2.38e-15!286;UBERON:0001872!3.67e-15!5;UBERON:0000483!6.58e-15!309;UBERON:0000119!1.22e-14!312;UBERON:0003076!5.65e-14!15;UBERON:0003057!5.65e-14!15;UBERON:0000369!1.02e-13!4;UBERON:0002435!1.02e-13!4;UBERON:0000204!1.02e-13!4;UBERON:0010082!1.02e-13!4;UBERON:0000475!4.85e-12!365;UBERON:0002680!3.14e-11!9;UBERON:0001895!3.14e-11!9;UBERON:0010092!3.14e-11!9;UBERON:0005383!9.75e-11!3;UBERON:0005382!9.75e-11!3;UBERON:0000349!2.43e-10!5;UBERON:0002771!2.46e-10!3;UBERON:0001896!5.53e-09!3;UBERON:0005290!5.53e-09!3;UBERON:0010096!5.53e-09!3;UBERON:0000988!5.85e-09!3;UBERON:0006331!1.11e-08!3;UBERON:0000481!7.64e-08!347;UBERON:0001873!1.07e-07!2;UBERON:0010122!1.07e-07!2;UBERON:0001870!2.46e-07!2;UBERON:0001876!2.46e-07!2;UBERON:0001894!3.29e-07!7;UBERON:0006222!3.29e-07!7;UBERON:0001897!3.34e-07!2;UBERON:0001875!4.25e-07!2;UBERON:0006514!4.25e-07!2;UBERON:0000062!6.95e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.91e-85;32!UBERON:0002791;1.84e-80;32!UBERON:0001893;7.54e-79;34!UBERON:0003528;2.87e-71;34!UBERON:0002020;2.87e-71;34!UBERON:0002619;5.76e-69;22!UBERON:0001950;2.44e-67;20!UBERON:0002780;2.73e-66;41!UBERON:0001890;2.73e-66;41!UBERON:0000956;1.35e-60;25!UBERON:0000203;1.35e-60;25!UBERON:0000073;1.02e-48;53!UBERON:0002616;1.02e-48;53!UBERON:0002420;6.19e-41;9!UBERON:0007245;6.19e-41;9!UBERON:0010009;6.19e-41;9!UBERON:0010011;6.19e-41;9!UBERON:0000454;6.19e-41;9!UBERON:0000955;1.21e-37;68!UBERON:0001017;2.19e-35;75!UBERON:0000200;2.22e-34;6!UBERON:0009663;3.07e-30;7!UBERON:0001016;2.20e-25;83!UBERON:0000369;6.12e-25;4!UBERON:0002435;6.12e-25;4!UBERON:0000204;6.12e-25;4!UBERON:0000125;2.08e-23;9!UBERON:0002308;2.08e-23;9!UBERON:0001871;1.46e-20;6!UBERON:0005383;3.32e-19;3!UBERON:0005382;3.32e-19;3!UBERON:0002021;7.03e-19;5!UBERON:0000349;9.71e-19;5!UBERON:0001870;2.43e-18;3!UBERON:0007023;1.93e-16;114!UBERON:0001873;2.29e-13;2!UBERON:0002771;8.00e-13;2!UBERON:0002702;8.24e-13;2!UBERON:0001876;1.36e-12;2!UBERON:0001897;1.81e-12;2!UBERON:0010225;1.81e-12;2!UBERON:0001875;3.23e-12;2!UBERON:0006514;3.23e-12;2!UBERON:0011216;9.47e-12;132!UBERON:0001872;4.84e-11;5!UBERON:0002037;4.03e-09;6!UBERON:0010314;2.13e-08;132!UBERON:0001894;4.70e-08;7!UBERON:0001874;1.46e-07;1!UBERON:0001882;1.80e-07;1!UBERON:0005403;1.80e-07;1!UBERON:0002022;3.01e-07;1!UBERON:0007190;4.70e-07;1!UBERON:0002581;6.49e-07;1!UBERON:0002902;6.49e-07;1!UBERON:0009899;6.49e-07;1!UBERON:0003112;9.45e-07;1!UBERON:0011158;9.45e-07;1!UBERON:0003128;9.45e-07;1!UBERON:0001703;9.45e-07;1!UBERON:0002241;9.45e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.59e-96,32;UBERON:0002780,1.59e-95,41;UBERON:0001890,1.59e-95,41;UBERON:0003080,1.59e-95,41;UBERON:0006240,1.59e-95,41;UBERON:0000073,5.17e-91,53;UBERON:0002616,5.17e-91,53;UBERON:0001893,9.90e-91,34;UBERON:0002791,1.75e-88,32;UBERON:0001049,6.23e-86,56;UBERON:0005068,6.23e-86,56;UBERON:0006241,6.23e-86,56;UBERON:0007135,6.23e-86,56;UBERON:0003528,3.72e-83,34;UBERON:0002020,3.72e-83,34;UBERON:0000955,7.63e-79,68;UBERON:0006238,7.63e-79,68;UBERON:0001017,5.31e-70,81;UBERON:0002619,6.56e-69,22;UBERON:0001950,2.73e-67,20;UBERON:0003056,5.28e-63,61;UBERON:0001016,1.37e-62,89;UBERON:0000956,1.52e-60,25;UBERON:0000203,1.52e-60,25;UBERON:0003075,2.91e-57,82;UBERON:0007284,2.91e-57,82;UBERON:0002346,2.26e-54,86;UBERON:0007023,3.30e-49,114;UBERON:0010371,4.43e-44,104;UBERON:0002420,5.16e-41,9;UBERON:0007245,5.16e-41,9;UBERON:0010009,5.16e-41,9;UBERON:0010011,5.16e-41,9;UBERON:0000454,5.16e-41,9;UBERON:0010314,4.14e-36,132;UBERON:0000200,2.65e-34,6;UBERON:0004121,2.49e-30,171;UBERON:0000924,2.49e-30,171;UBERON:0006601,2.49e-30,171;UBERON:0009663,3.00e-30,7;UBERON:0011216,3.56e-25,223;UBERON:0000369,5.94e-25,4;UBERON:0002435,5.94e-25,4;UBERON:0000204,5.94e-25,4;UBERON:0010082,5.94e-25,4;UBERON:0000125,2.04e-23,9;UBERON:0002308,2.04e-23,9;UBERON:0000025,2.38e-21,192;UBERON:0001871,1.72e-20,6;UBERON:0005383,3.33e-19,3;UBERON:0005382,3.33e-19,3;UBERON:0002021,7.37e-19,5;UBERON:0000349,8.46e-19,5;UBERON:0001870,2.22e-18,3;UBERON:0004111,6.28e-16,240;UBERON:0001873,2.29e-13,2;UBERON:0010122,2.29e-13,2;UBERON:0002702,7.54e-13,2;UBERON:0002771,1.01e-12,2;UBERON:0001876,1.14e-12,2;UBERON:0001897,2.04e-12,2;UBERON:0010225,2.04e-12,2;UBERON:0001875,3.23e-12,2;UBERON:0006514,3.23e-12,2;UBERON:0000483,3.15e-11,306;UBERON:0000119,4.62e-11,309;UBERON:0001872,5.18e-11,5;UBERON:0002037,4.04e-09,6;UBERON:0006215,4.04e-09,6;UBERON:0001894,5.00e-08,7;UBERON:0006222,5.00e-08,7;UBERON:0001874,1.46e-07,1;UBERON:0001882,1.75e-07,1;UBERON:0005403,1.75e-07,1;UBERON:0002022,2.52e-07,1;UBERON:0007190,4.57e-07,1;UBERON:0002581,6.88e-07,1;UBERON:0002902,7.29e-07,1;UBERON:0009899,7.29e-07,1;UBERON:0003112,8.67e-07,1;UBERON:0011158,8.67e-07,1;UBERON:0003128,8.67e-07,1;UBERON:0001703,8.67e-07,1;UBERON:0002241,8.67e-07,1;UBERON:0004761,8.67e-07,1;UBERON:0009617,8.67e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,2.81338832821025,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,2.69027484669369,0,0,0.0874599999961957,0,0,0,0,0,0,0,11.5146380155799,25.0840592340849,4.5774520895125,3.20679853800551,2.65992857058193,2.63262476584767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,7.02793337176017,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,5.57135004411733,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0.135904206073614,0,0,0,4.20294202096853,1.9166753044879,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90684768556206,0,0,0,0,0,5.83195743917037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,5.12510312588245,8.13741049592249,0.573409195690071,0.332787154610557,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25382057376577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95552988995123,5.6678630530234,5.58718506700029,5.12790910601888,0.504143392443436,2.48966108871184,1.93770774758221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44441681553813,0.781078098613847,9.30090584255328,3.36103794027706,0.546974809018219,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0.815636795721981,2.63091094251396,0,0,0,30.4804244437044,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,2.10773619591836,1.74540276136151,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,1.65833887891756,7.86090768550404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,2.81338832821025,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,2.69027484669369,0,0,0.0874599999961957,0,0,0,0,0,0,0,11.5146380155799,25.0840592340849,4.5774520895125,3.20679853800551,2.65992857058193,2.63262476584767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,7.02793337176017,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,5.57135004411733,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0.135904206073614,0,0,0,4.20294202096853,1.9166753044879,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90684768556206,0,0,0,0,0,5.83195743917037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,5.12510312588245,8.13741049592249,0.573409195690071,0.332787154610557,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25382057376577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95552988995123,5.6678630530234,5.58718506700029,5.12790910601888,0.504143392443436,2.48966108871184,1.93770774758221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44441681553813,0.781078098613847,9.30090584255328,3.36103794027706,0.546974809018219,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0.815636795721981,2.63091094251396,0,0,0,30.4804244437044,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,2.10773619591836,1.74540276136151,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,1.65833887891756,7.86090768550404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p12@DLG1 | |short_description=p12@DLG1 | ||
}} | }} |
Latest revision as of 16:45, 17 September 2015
Short description: | p12@DLG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_DLG1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000453607_5end |
EntrezGene: | DLG1 |
HGNC: | 2900 |
UniProt: | C9IYP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data