FFCP PHASE1:Hg19::chr1:10057107..10057116,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116362 | |EntrezGene=116362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30316 | |HGNC=30316 | ||
|TSSclassifier=strong | |||
|UniProt=Q96R05 | |UniProt=Q96R05 | ||
|association_with_transcript=-138bp_to_NM_052960,uc001aqq.2,uc009vms.2_5end | |association_with_transcript=-138bp_to_NM_052960,uc001aqq.2,uc009vms.2_5end | ||
|cluster_id=chr1:10057107..10057116,+ | |||
|coexpression_cluster_id=C625 | |||
|description=CAGE_peak_5_at_RBP7_5end | |description=CAGE_peak_5_at_RBP7_5end | ||
|id=chr1:10057107..10057116,+ | |id=chr1:10057107..10057116,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.87e-60!42;CL:0000860!2.12e-55!45;CL:0000766!3.57e-44!76;CL:0002194!4.38e-44!63;CL:0000576!4.38e-44!63;CL:0000040!4.38e-44!63;CL:0000559!4.38e-44!63;CL:0002009!2.98e-42!65;CL:0000839!3.92e-38!70;CL:0000557!2.22e-37!71;CL:0000763!1.42e-24!112;CL:0000049!1.42e-24!112;CL:0002087!2.49e-20!119;CL:0000738!3.35e-20!140;CL:0002393!5.66e-16!9;CL:0002397!5.66e-16!9;CL:0002031!5.87e-16!124;CL:0000037!1.99e-13!172;CL:0000566!1.99e-13!172;CL:0002032!2.19e-12!165;CL:0000837!2.19e-12!165;CL:0000988!7.55e-12!182 | |ontology_enrichment_celltype=CL:0002057!1.87e-60!42;CL:0000860!2.12e-55!45;CL:0000766!3.57e-44!76;CL:0002194!4.38e-44!63;CL:0000576!4.38e-44!63;CL:0000040!4.38e-44!63;CL:0000559!4.38e-44!63;CL:0002009!2.98e-42!65;CL:0000839!3.92e-38!70;CL:0000557!2.22e-37!71;CL:0000763!1.42e-24!112;CL:0000049!1.42e-24!112;CL:0002087!2.49e-20!119;CL:0000738!3.35e-20!140;CL:0002393!5.66e-16!9;CL:0002397!5.66e-16!9;CL:0002031!5.87e-16!124;CL:0000037!1.99e-13!172;CL:0000566!1.99e-13!172;CL:0002032!2.19e-12!165;CL:0000837!2.19e-12!165;CL:0000988!7.55e-12!182 | ||
|ontology_enrichment_celltype_v019=CL:0000576;9.21e-42;48!CL:0000860;1.80e-38;33!CL:0002057;1.80e-38;33!CL:0000766;6.26e-35;69!CL:0002393;6.47e-33;6!CL:0002397;6.47e-33;6!CL:0000473;3.36e-28;39!CL:0000234;3.36e-28;39!CL:0000875;1.37e-16;3!CL:0002396;1.37e-16;3!CL:0000094;3.75e-11;8!CL:0000763;1.08e-10;100!CL:0002087;2.87e-09;104!CL:0000767;2.30e-08;3!CL:0000081;3.95e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.16e-81,42;CL:0002057,7.16e-81,42;CL:0000473,4.51e-70,48;CL:0000234,4.51e-70,48;CL:0000766,2.77e-60,72;CL:0002194,6.02e-55,59;CL:0000576,6.02e-55,59;CL:0000040,6.02e-55,59;CL:0000559,6.02e-55,59;CL:0002009,5.39e-53,61;CL:0000839,1.27e-48,66;CL:0002393,3.58e-48,9;CL:0002397,3.58e-48,9;CL:0000557,7.94e-48,67;CL:0000763,2.37e-38,108;CL:0000049,2.37e-38,108;CL:0000738,2.99e-29,136;CL:0002087,1.03e-25,115;CL:0002031,2.03e-24,120;CL:0002032,8.88e-24,161;CL:0000837,8.88e-24,161;CL:0000037,1.55e-22,168;CL:0000988,4.42e-21,177;CL:0000875,6.14e-17,3;CL:0002396,6.14e-17,3;CL:0000094,3.87e-11,8;CL:0000767,2.22e-08,3;CL:0000081,4.04e-08,11;CL:0000134,1.89e-07,354;CL:0002320,3.47e-07,361;CL:0000219,6.16e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.66e-55;42!CL:0000049;7.56e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-38!102;UBERON:0003061!1.16e-38!102;UBERON:0002193!7.51e-35!112;UBERON:0002371!1.87e-31!80;UBERON:0001474!3.31e-28!86;UBERON:0002405!4.96e-25!115;UBERON:0004765!6.57e-23!101;UBERON:0001434!6.57e-23!101;UBERON:0003081!1.74e-14!216;UBERON:0002204!3.11e-10!167;UBERON:0007023!9.46e-09!115;UBERON:0000178!2.44e-07!15;UBERON:0000179!2.44e-07!15;UBERON:0000463!2.44e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.16e-38!102;UBERON:0003061!1.16e-38!102;UBERON:0002193!7.51e-35!112;UBERON:0002371!1.87e-31!80;UBERON:0001474!3.31e-28!86;UBERON:0002405!4.96e-25!115;UBERON:0004765!6.57e-23!101;UBERON:0001434!6.57e-23!101;UBERON:0003081!1.74e-14!216;UBERON:0002204!3.11e-10!167;UBERON:0007023!9.46e-09!115;UBERON:0000178!2.44e-07!15;UBERON:0000179!2.44e-07!15;UBERON:0000463!2.44e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;2.47e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.18e-42,98;UBERON:0003061,2.18e-42,98;UBERON:0002371,1.39e-41,76;UBERON:0001474,3.59e-38,82;UBERON:0002193,6.16e-38,108;UBERON:0004765,2.53e-34,90;UBERON:0002405,4.77e-33,93;UBERON:0001434,2.28e-30,100;UBERON:0003081,2.20e-17,203;UBERON:0002204,5.17e-16,167;UBERON:0003714,4.42e-11,2;UBERON:0000926,5.20e-09,315;UBERON:0004120,5.20e-09,315;UBERON:0006603,5.20e-09,315;UBERON:0002384,1.51e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,0.767658796194425,2.94150634300544,0,0,0,0,0,0,4.43196326825502,1.80490002723128,3.25516306073778,0.223915474239924,0,0.257575567634187,0.872389432677388,0.377875943688809,0.485168122375632,0.697287110717054,1.23350366406548,1.54853185447552,1.1507695692886,2.0492856522328,0.47296445977717,1.37898272294647,1.93645405075148,1.35426486594342,0.564727018627814,0.818718450173537,0.449446968890169,0.306083892370903,1.60464513538047,1.91801137739712,0.989553900560148,1.19678194572979,0.426224750532694,0.870627715885752,0,1.86846674698672,2.26123798731069,2.60741459210101,0.868755378820466,0.605399502633369,1.47311054395026,0.632924774881769,3.59133986730301,3.18906449947565,3.56419697364239,4.4931452458598,2.85336096398862,4.66104201421532,1.71007646244749,3.58050018958362,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.530119073285941,0,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,1.42939065274673,1.23408681925858,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0,0.160753148465019,0.550157746388935,0.83088067605837,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.307988420568741,0,0,0,0,0,0,0.219881033490858,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.469919589899268,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.218531143927391,0,0,0,0,0.50141507858475,0.151557396436479,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,0.767658796194425,2.94150634300544,0,0,0,0,0,0,4.43196326825502,1.80490002723128,3.25516306073778,0.223915474239924,0,0.257575567634187,0.872389432677388,0.377875943688809,0.485168122375632,0.697287110717054,1.23350366406548,1.54853185447552,1.1507695692886,2.0492856522328,0.47296445977717,1.37898272294647,1.93645405075148,1.35426486594342,0.564727018627814,0.818718450173537,0.449446968890169,0.306083892370903,1.60464513538047,1.91801137739712,0.989553900560148,1.19678194572979,0.426224750532694,0.870627715885752,0,1.86846674698672,2.26123798731069,2.60741459210101,0.868755378820466,0.605399502633369,1.47311054395026,0.632924774881769,3.59133986730301,3.18906449947565,3.56419697364239,4.4931452458598,2.85336096398862,4.66104201421532,1.71007646244749,3.58050018958362,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.530119073285941,0,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,1.42939065274673,1.23408681925858,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0,0.160753148465019,0.550157746388935,0.83088067605837,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.307988420568741,0,0,0,0,0,0,0.219881033490858,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.469919589899268,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.218531143927391,0,0,0,0,0.50141507858475,0.151557396436479,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@RBP7 | |short_description=p5@RBP7 | ||
}} | }} |
Latest revision as of 04:00, 25 September 2015
Short description: | p5@RBP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RBP7_5end |
Coexpression cluster: | C625_CD14_Neutrophils_Basophils_CD14CD16_Peripheral_Eosinophils_Macrophage |
Association with transcript: | -138bp_to_NM_052960, uc001aqq.2, uc009vms.2_5end |
EntrezGene: | RBP7 |
HGNC: | 30316 |
UniProt: | Q96R05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.18e-42 | 98 |
blood island | 2.18e-42 | 98 |
bone marrow | 1.39e-41 | 76 |
bone element | 3.59e-38 | 82 |
hemolymphoid system | 6.16e-38 | 108 |
skeletal element | 2.53e-34 | 90 |
immune system | 4.77e-33 | 93 |
skeletal system | 2.28e-30 | 100 |
lateral plate mesoderm | 2.20e-17 | 203 |
musculoskeletal system | 5.17e-16 | 167 |
neural tissue | 4.42e-11 | 2 |
mesoderm | 5.20e-09 | 315 |
mesoderm-derived structure | 5.20e-09 | 315 |
presumptive mesoderm | 5.20e-09 | 315 |
connective tissue | 1.51e-07 | 371 |