FFCP PHASE1:Hg19::chr12:47610249..47610260,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:47610249..47610260,+
|short_description=p7@FAM113B
|description=CAGE_peak_7_at_FAM113B_5end
|association_with_transcript=-109bp_to_ENST00000548348_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91523 | |EntrezGene=91523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28255 | |HGNC=28255 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRF7 | |UniProt=F8VRF7 | ||
|association_with_transcript=-109bp_to_ENST00000548348_5end | |||
|cluster_id=chr12:47610249..47610260,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_7_at_FAM113B_5end | |||
|id=chr12:47610249..47610260,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.43e-41!53;CL:0000051!2.43e-41!53;CL:0000838!1.07e-39!52;CL:0000791!1.90e-38!18;CL:0000789!1.90e-38!18;CL:0002420!1.90e-38!18;CL:0002419!1.90e-38!18;CL:0000790!1.90e-38!18;CL:0000084!2.51e-29!25;CL:0000827!2.51e-29!25;CL:0000625!3.02e-27!11;CL:0002087!3.17e-24!119;CL:0000738!2.31e-21!140;CL:0002031!1.70e-17!124;CL:0000037!3.60e-16!172;CL:0000566!3.60e-16!172;CL:0000624!2.37e-15!6;CL:0000988!1.19e-14!182;CL:0002032!3.08e-13!165;CL:0000837!3.08e-13!165;CL:0000945!4.89e-09!24;CL:0000826!4.89e-09!24;CL:0000842!1.40e-08!3;CL:0000898!1.90e-08!3;CL:0000623!8.17e-08!3;CL:0000825!8.17e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.64e-59;18!CL:0000789;3.64e-59;18!CL:0002419;3.64e-59;18!CL:0000625;7.24e-44;11!CL:0000084;1.17e-41;25!CL:0000624;1.36e-20;6!CL:0000226;2.88e-15;3!CL:0000842;2.88e-15;3!CL:0000542;3.26e-12;53!CL:0000898;1.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.17e-59,18;CL:0000789,3.17e-59,18;CL:0002420,3.17e-59,18;CL:0002419,3.17e-59,18;CL:0000790,3.17e-59,18;CL:0000625,6.65e-44,11;CL:0000084,1.06e-41,25;CL:0000827,1.06e-41,25;CL:0000838,6.72e-21,52;CL:0000624,1.28e-20,6;CL:0000542,1.95e-20,53;CL:0000051,1.95e-20,53;CL:0000226,2.31e-15,3;CL:0000842,2.31e-15,3;CL:0002087,4.07e-11,115;CL:0000738,8.82e-09,136;CL:0000898,1.03e-07,3;CL:0002031,5.16e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.64e-59;18!CL:0000051;3.26e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.01e-15!15;UBERON:0000179!3.01e-15!15;UBERON:0000463!3.01e-15!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-24;15!UBERON:0000179;1.57e-24;15!UBERON:0000463;1.57e-24;15!UBERON:0002390;4.14e-13;32!UBERON:0002193;2.65e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.51e-24,15;UBERON:0000179,1.51e-24,15;UBERON:0000463,1.51e-24,15 | |||
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| ||
|short_description=p7@FAM113B | |||
}} | }} |
Latest revision as of 12:27, 18 September 2015
Short description: | p7@FAM113B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM113B_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -109bp_to_ENST00000548348_5end |
EntrezGene: | FAM113B |
HGNC: | 28255 |
UniProt: | F8VRF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.17e-59 | 18 |
alpha-beta T cell | 3.17e-59 | 18 |
immature T cell | 3.17e-59 | 18 |
mature T cell | 3.17e-59 | 18 |
immature alpha-beta T cell | 3.17e-59 | 18 |
CD8-positive, alpha-beta T cell | 6.65e-44 | 11 |
T cell | 1.06e-41 | 25 |
pro-T cell | 1.06e-41 | 25 |
lymphoid lineage restricted progenitor cell | 6.72e-21 | 52 |
CD4-positive, alpha-beta T cell | 1.28e-20 | 6 |
lymphocyte | 1.95e-20 | 53 |
common lymphoid progenitor | 1.95e-20 | 53 |
single nucleate cell | 2.31e-15 | 3 |
mononuclear cell | 2.31e-15 | 3 |
nongranular leukocyte | 4.07e-11 | 115 |
leukocyte | 8.82e-09 | 136 |
naive T cell | 1.03e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 5.16e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.51e-24 | 15 |
haemolymphatic fluid | 1.51e-24 | 15 |
organism substance | 1.51e-24 | 15 |