FFCP PHASE1:Hg19::chr12:50135333..50135346,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:50135333..50135346,+
|short_description=p1@TMBIM6
|description=CAGE_peak_1_at_TMBIM6_5end
|association_with_transcript=0bp_to_ENST00000267115,ENST00000541...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7009 | |EntrezGene=7009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11723 | |HGNC=11723 | ||
|TSSclassifier=strong | |||
|UniProt=P55061,B7Z984,F8W201,F8W1G3,F8VR05,F8W034 | |UniProt=P55061,B7Z984,F8W201,F8W1G3,F8VR05,F8W034 | ||
|association_with_transcript=0bp_to_ENST00000267115,ENST00000541612,ENST00000546914,ENST00000548894,ENST00000552635,ENST00000552699_5end | |||
|cluster_id=chr12:50135333..50135346,+ | |||
|description=CAGE_peak_1_at_TMBIM6_5end | |||
|id=chr12:50135333..50135346,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.23e-16!63;CL:0000576!1.23e-16!63;CL:0000040!1.23e-16!63;CL:0000559!1.23e-16!63;CL:0000766!2.00e-16!76;CL:0002009!2.28e-16!65;CL:0000860!1.24e-14!45;CL:0002057!1.32e-14!42;CL:0000839!2.41e-14!70;CL:0000063!2.64e-13!578;CL:0000557!3.06e-13!71;CL:0000548!3.10e-12!679;CL:0000004!3.10e-12!679;CL:0000255!3.10e-12!679;CL:0000003!1.27e-11!722;CL:0000012!1.71e-11!682;CL:0000144!1.12e-08!625;CL:0002371!1.71e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.25e-14;39!CL:0000234;1.25e-14;39!CL:0000860;2.81e-14;33!CL:0002057;2.81e-14;33!CL:0000576;2.45e-09;48!CL:0000766;3.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.17e-18,48;CL:0000234,6.17e-18,48;CL:0002194,4.00e-17,59;CL:0000576,4.00e-17,59;CL:0000040,4.00e-17,59;CL:0000559,4.00e-17,59;CL:0002009,8.08e-17,61;CL:0000766,9.11e-17,72;CL:0000839,1.17e-14,66;CL:0000860,1.32e-14,42;CL:0002057,1.32e-14,42;CL:0000557,1.66e-13,67;CL:0000066,9.82e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;8.25e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.16e-13!80;UBERON:0002390!5.43e-12!102;UBERON:0003061!5.43e-12!102;UBERON:0001474!1.20e-11!86;UBERON:0002405!1.22e-11!115;UBERON:0002193!1.98e-11!112;UBERON:0004765!2.94e-10!101;UBERON:0001434!2.94e-10!101;UBERON:0000926!5.15e-10!448;UBERON:0004120!5.15e-10!448;UBERON:0006603!5.15e-10!448;UBERON:0000062!1.86e-07!511;UBERON:0000467!2.56e-07!625;UBERON:0000468!2.61e-07!659;UBERON:0000480!2.91e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.62e-13,76;UBERON:0004765,1.61e-12,90;UBERON:0002390,4.50e-12,98;UBERON:0003061,4.50e-12,98;UBERON:0001474,8.95e-12,82;UBERON:0002193,1.79e-11,108;UBERON:0002405,7.47e-11,93;UBERON:0001434,4.38e-10,100 | |||
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| ||
|short_description=p1@TMBIM6 | |||
}} | }} |
Latest revision as of 16:56, 18 September 2015
Short description: | p1@TMBIM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMBIM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000267115, ENST00000541612, ENST00000546914, ENST00000548894, ENST00000552635, ENST00000552699_5end |
EntrezGene: | TMBIM6 |
HGNC: | 11723 |
UniProt: | P55061B7Z984F8W201F8W1G3F8VR05F8W034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.17e-18 | 48 |
phagocyte | 6.17e-18 | 48 |
monopoietic cell | 4.00e-17 | 59 |
monocyte | 4.00e-17 | 59 |
monoblast | 4.00e-17 | 59 |
promonocyte | 4.00e-17 | 59 |
macrophage dendritic cell progenitor | 8.08e-17 | 61 |
myeloid leukocyte | 9.11e-17 | 72 |
myeloid lineage restricted progenitor cell | 1.17e-14 | 66 |
classical monocyte | 1.32e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-14 | 42 |
granulocyte monocyte progenitor cell | 1.66e-13 | 67 |
epithelial cell | 9.82e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.62e-13 | 76 |
skeletal element | 1.61e-12 | 90 |
hematopoietic system | 4.50e-12 | 98 |
blood island | 4.50e-12 | 98 |
bone element | 8.95e-12 | 82 |
hemolymphoid system | 1.79e-11 | 108 |
immune system | 7.47e-11 | 93 |
skeletal system | 4.38e-10 | 100 |