FFCP PHASE1:Hg19::chr1:156626643..156626652,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63827 | |EntrezGene=63827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23059 | |HGNC=23059 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_ENST00000496038_5end | |association_with_transcript=122bp_to_ENST00000496038_5end | ||
|cluster_id=chr1:156626643..156626652,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_14_at_BCAN_5end | |description=CAGE_peak_14_at_BCAN_5end | ||
|id=chr1:156626643..156626652,+ | |id=chr1:156626643..156626652,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001869!7.82e-38!32;UBERON:0002020!1.17e-35!34;UBERON:0003528!1.17e-35!34;UBERON:0001893!1.92e-35!34;UBERON:0002780!1.17e-32!41;UBERON:0001890!1.17e-32!41;UBERON:0006240!1.17e-32!41;UBERON:0002791!2.02e-32!33;UBERON:0003080!8.41e-32!42;UBERON:0001049!2.98e-31!57;UBERON:0005068!2.98e-31!57;UBERON:0006241!2.98e-31!57;UBERON:0007135!2.98e-31!57;UBERON:0007023!3.26e-30!115;UBERON:0002616!4.80e-30!59;UBERON:0002619!8.93e-28!22;UBERON:0001950!8.58e-26!20;UBERON:0000073!5.72e-25!94;UBERON:0001016!5.72e-25!94;UBERON:0001017!1.16e-24!82;UBERON:0000955!1.27e-24!69;UBERON:0006238!1.27e-24!69;UBERON:0000956!2.83e-24!25;UBERON:0000203!2.83e-24!25;UBERON:0005743!2.69e-23!86;UBERON:0003075!2.59e-21!86;UBERON:0007284!2.59e-21!86;UBERON:0003056!9.16e-21!61;UBERON:0002346!3.77e-20!90;UBERON:0000033!2.79e-13!123;UBERON:0002308!5.84e-13!9;UBERON:0000125!5.84e-13!9;UBERON:0000153!1.91e-12!129;UBERON:0007811!1.91e-12!129;UBERON:0004121!1.38e-11!169;UBERON:0000924!3.40e-11!173;UBERON:0006601!3.40e-11!173;UBERON:0000369!5.15e-11!4;UBERON:0002435!5.15e-11!4;UBERON:0000204!5.15e-11!4;UBERON:0010082!5.15e-11!4;UBERON:0009663!6.30e-11!7;UBERON:0001871!4.01e-10!7;UBERON:0001872!2.00e-09!5;UBERON:0002420!1.62e-08!9;UBERON:0007245!1.62e-08!9;UBERON:0010009!1.62e-08!9;UBERON:0010011!1.62e-08!9;UBERON:0000454!1.62e-08!9;UBERON:0000200!9.25e-08!6;UBERON:0002771!1.26e-07!3;UBERON:0005383!4.08e-07!3;UBERON:0005382!4.08e-07!3;UBERON:0000064!6.29e-07!219;UBERON:0000025!9.13e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p14@BCAN | |short_description=p14@BCAN | ||
}} | }} |
Latest revision as of 16:53, 17 September 2015
Short description: | p14@BCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_BCAN_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 122bp_to_ENST00000496038_5end |
EntrezGene: | BCAN |
HGNC: | 23059 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |