FFCP PHASE1:Hg19::chr12:53845879..53845894,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:53845879..53845894,+
|short_description=p1@PCBP2
|description=CAGE_peak_1_at_PCBP2_5end
|association_with_transcript=0bp_to_ENST00000359282,ENST0000043723...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5094 | |EntrezGene=5094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8648 | |HGNC=8648 | ||
|TSSclassifier=strong | |||
|UniProt=Q68Y55,G3V0E8,Q32Q82,Q15366,F8VYL7,Q59HD4,Q6IPF4,A8K7X6 | |UniProt=Q68Y55,G3V0E8,Q32Q82,Q15366,F8VYL7,Q59HD4,Q6IPF4,A8K7X6 | ||
|association_with_transcript=0bp_to_ENST00000359282,ENST00000437231,ENST00000447282,NM_001098620,NM_001128911,NM_001128912,NM_001128913,NM_001128914,NM_005016,NM_031989,uc001sdb.3,uc001sdc.3,uc001sdd.3,uc001sde.3,uc001sdf.3,uc001sdi.3,uc001sdl.3,uc009zmz.1_5end | |||
|cluster_id=chr12:53845879..53845894,+ | |||
|description=CAGE_peak_1_at_PCBP2_5end | |||
|id=chr12:53845879..53845894,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!2.66e-09!22;DOID:2994!2.66e-09!22;DOID:0050687!2.11e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.61e-09;22!DOID:2994;2.61e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.66e-09,22;DOID:2994,2.66e-09,22;DOID:0050687,2.11e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@PCBP2 | |||
}} | }} |
Latest revision as of 03:10, 19 September 2015
Short description: | p1@PCBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359282, ENST00000437231, ENST00000447282, NM_001098620, NM_001128911, NM_001128912, NM_001128913, NM_001128914, NM_005016, NM_031989, uc001sdb.3, uc001sdc.3, uc001sdd.3, uc001sde.3, uc001sdf.3, uc001sdi.3, uc001sdl.3, uc009zmz.1_5end |
EntrezGene: | PCBP2 |
HGNC: | 8648 |
UniProt: | Q68Y55G3V0E8Q32Q82Q15366F8VYL7Q59HD4Q6IPF4A8K7X6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.66e-09 | 22 |
germ cell cancer | 2.66e-09 | 22 |
cell type cancer | 2.11e-07 | 143 |