FFCP PHASE1:Hg19::chr12:54426831..54426836,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:54426831..54426836,+
|short_description=p10@HOXC5
|description=CAGE_peak_10_at_HOXC5_5end
|association_with_transcript=0bp_to_NM_018953,uc001sew.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3222 | |EntrezGene=3222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5127 | |HGNC=5127 | ||
|TSSclassifier=strong | |||
|UniProt=Q00444 | |UniProt=Q00444 | ||
|association_with_transcript=0bp_to_NM_018953,uc001sew.2_5end | |||
|cluster_id=chr12:54426831..54426836,+ | |||
|description=CAGE_peak_10_at_HOXC5_5end | |||
|id=chr12:54426831..54426836,+ | |||
|ontology_enrichment_celltype=CL:0002570!2.72e-11!8;CL:0002334!5.96e-09!12;CL:0000055!5.69e-08!180;CL:0000188!6.21e-08!9;CL:0002580!9.71e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002617;4.47e-18;2!CL:0002580;2.25e-12;3!CL:0002570;1.52e-10;8!CL:0000062;2.99e-09;9!CL:0002334;4.69e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,5.34e-18,2;CL:0002580,1.78e-12,3;CL:0002570,1.42e-10,8;CL:0000136,1.94e-09,15;CL:0000062,1.40e-07,11;CL:0000375,1.40e-07,11;CL:0000335,1.40e-07,11;CL:0002334,4.18e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000335;1.18e-07;11 | |||
|ontology_enrichment_disease=DOID:2394!3.67e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!1.99e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001443;1.49e-19;11!UBERON:0000310;6.48e-14;10!UBERON:0002426;1.80e-10;1!UBERON:0003831;1.80e-10;1!UBERON:0003898;1.80e-10;1!UBERON:0004830;1.80e-10;1!UBERON:0003830;1.80e-10;1!UBERON:0005175;1.80e-10;1!UBERON:0001774;1.80e-10;1!UBERON:0001103;1.80e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,1.44e-19,11;UBERON:0000310,6.07e-14,10;UBERON:0002426,1.98e-10,1;UBERON:0003831,1.98e-10,1;UBERON:0003898,1.98e-10,1;UBERON:0004830,1.98e-10,1;UBERON:0003830,1.98e-10,1;UBERON:0005175,1.98e-10,1;UBERON:0001774,1.98e-10,1;UBERON:0001103,1.98e-10,1;UBERON:0010084,1.98e-10,1;UBERON:0000915,2.19e-07,52 | |||
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| ||
|short_description=p10@HOXC5 | |||
}} | }} |
Latest revision as of 04:59, 19 September 2015
Short description: | p10@HOXC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HOXC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_018953, uc001sew.2_5end |
EntrezGene: | HOXC5 |
HGNC: | 5127 |
UniProt: | Q00444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 5.34e-18 | 2 |
preadipocyte of the breast | 1.78e-12 | 3 |
mesenchymal stem cell of adipose | 1.42e-10 | 8 |
fat cell | 1.94e-09 | 15 |
osteoblast | 1.40e-07 | 11 |
osteoprogenitor cell | 1.40e-07 | 11 |
mesenchyme condensation cell | 1.40e-07 | 11 |
preadipocyte | 4.18e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
chest | 1.44e-19 | 11 |
breast | 6.07e-14 | 10 |
chest muscle | 1.98e-10 | 1 |
respiratory system muscle | 1.98e-10 | 1 |
skeletal muscle of trunk | 1.98e-10 | 1 |
respiratory system skeletal muscle | 1.98e-10 | 1 |
thoracic segment muscle | 1.98e-10 | 1 |
chest organ | 1.98e-10 | 1 |
muscle of trunk | 1.98e-10 | 1 |
diaphragm | 1.98e-10 | 1 |
future diaphragm | 1.98e-10 | 1 |
thoracic segment of trunk | 2.19e-07 | 52 |