FFCP PHASE1:Hg19::chr12:56114226..56114241,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:56114226..56114241,+
|short_description=p3@RDH5
|description=CAGE_peak_3_at_RDH5_5end
|association_with_transcript=29bp_to_ENST00000548082_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5959 | |EntrezGene=5959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9940 | |HGNC=9940 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000548082_5end | |||
|cluster_id=chr12:56114226..56114241,+ | |||
|description=CAGE_peak_3_at_RDH5_5end | |||
|id=chr12:56114226..56114241,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.44e-08!15;CL:0002540!5.38e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.79e-14;13!CL:0002521;2.41e-09;3!CL:0002561;8.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.66e-12,15;CL:0002521,2.20e-09,3;CL:0002561,6.75e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.81e-08!83;UBERON:0002329!3.81e-08!83;UBERON:0003077!3.81e-08!83;UBERON:0003059!3.81e-08!83;UBERON:0007282!3.81e-08!83;UBERON:0009618!3.81e-08!83;UBERON:0007285!3.81e-08!83;UBERON:0000481!4.05e-08!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.41e-09;3!UBERON:0002072;2.53e-09;5!UBERON:0000160;4.15e-09;17!UBERON:0001013;7.53e-07;14!UBERON:0005409;8.07e-07;22!UBERON:0005933;8.84e-07;2!UBERON:0005942;8.84e-07;2!UBERON:0005932;8.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.20e-09,3;UBERON:0000160,3.21e-09,17;UBERON:0002072,3.32e-09,5;UBERON:0005933,6.75e-07,2;UBERON:0005942,6.75e-07,2;UBERON:0005932,6.75e-07,2;UBERON:0001013,8.55e-07,14 | |||
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| ||
|short_description=p3@RDH5 | |||
}} | }} |
Latest revision as of 08:01, 19 September 2015
Short description: | p3@RDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RDH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000548082_5end |
EntrezGene: | RDH5 |
HGNC: | 9940 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.66e-12 | 15 |
subcutaneous fat cell | 2.20e-09 | 3 |
outer root sheath cell | 6.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.20e-09 | 3 |
intestine | 3.21e-09 | 17 |
hypodermis | 3.32e-09 | 5 |
hair root sheath | 6.75e-07 | 2 |
hair outer root sheath | 6.75e-07 | 2 |
bulb of hair follicle | 6.75e-07 | 2 |
adipose tissue | 8.55e-07 | 14 |