FFCP PHASE1:Hg19::chr12:57328187..57328195,-: Difference between revisions
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|id=chr12:57328187..57328195,-
|short_description=p1@SDR9C7
|description=CAGE_peak_1_at_SDR9C7_5end
|association_with_transcript=0bp_to_ENST00000293502,NM_148897_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121214 | |EntrezGene=121214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29958 | |HGNC=29958 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEX9 | |UniProt=Q8NEX9 | ||
|association_with_transcript=0bp_to_ENST00000293502,NM_148897_5end | |||
|cluster_id=chr12:57328187..57328195,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_SDR9C7_5end | |||
|id=chr12:57328187..57328195,- | |||
|ontology_enrichment_celltype=CL:0002159!4.03e-19!13;CL:0000622!1.08e-17!5;CL:0000362!1.86e-16!8;CL:0000154!9.08e-15!6;CL:0000317!8.51e-12!2;CL:1000448!8.51e-12!2;CL:0002308!8.51e-12!2;CL:0002140!8.51e-12!2;CL:0000575!1.46e-11!2;CL:0000312!4.76e-10!5;CL:0000150!7.01e-10!9;CL:0002077!4.48e-09!33;CL:0000240!1.89e-08!6;CL:0000311!1.89e-08!6;CL:0000079!1.89e-08!6;CL:0000237!1.89e-08!6;CL:0000036!1.89e-08!6;CL:0000357!1.89e-08!6;CL:0000114!1.89e-08!6;CL:0002623!2.67e-08!3;CL:0002621!4.72e-08!3;CL:0000068!7.20e-08!3;CL:0000069!7.20e-08!3;CL:0000307!7.20e-08!3;CL:0000377!7.20e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000622;7.47e-28;5!CL:0000154;2.87e-23;6!CL:0000317;3.60e-18;2!CL:1000448;3.60e-18;2!CL:0002308;3.60e-18;2!CL:0002140;3.60e-18;2!CL:0000150;1.32e-15;9!CL:0002623;1.41e-12;3!CL:0002159;4.17e-10;14!CL:0000244;1.77e-09;4!CL:0000731;1.77e-09;4!CL:0000362;3.13e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,8.89e-28,5;CL:0000154,3.32e-23,6;CL:0000317,4.89e-18,2;CL:1000448,4.89e-18,2;CL:0002308,4.89e-18,2;CL:0002140,4.89e-18,2;CL:0000150,1.45e-15,9;CL:0002623,1.33e-12,3;CL:0002159,4.43e-10,14;CL:0000244,1.66e-09,4;CL:0000731,1.66e-09,4;CL:0000362,3.50e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.54e-10;1 | |||
|ontology_enrichment_disease=DOID:3151!6.08e-07!1;DOID:3149!6.08e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.84e-10;1!DOID:3149;2.84e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.10e-10,1;DOID:3149,3.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.66e-15!21;UBERON:0001042!2.32e-13!10;UBERON:0009145!2.32e-13!10;UBERON:0001003!3.06e-13!14;UBERON:0007376!3.06e-13!14;UBERON:0007383!3.06e-13!14;UBERON:0003408!6.85e-13!10;UBERON:0003102!1.15e-12!95;UBERON:0006562!4.00e-12!11;UBERON:0002419!8.51e-12!2;UBERON:0007771!8.51e-12!2;UBERON:0003297!8.51e-12!2;UBERON:0001821!8.51e-12!2;UBERON:0003487!8.51e-12!2;UBERON:0001820!8.51e-12!2;UBERON:0005089!8.51e-12!2;UBERON:0005088!8.51e-12!2;UBERON:0001004!1.66e-11!72;UBERON:0000165!2.57e-11!28;UBERON:0000930!2.57e-11!28;UBERON:0000078!1.52e-10!18;UBERON:0001444!1.75e-09!48;UBERON:0000161!8.37e-09!35;UBERON:0001044!1.21e-08!6;UBERON:0003293!1.21e-08!6;UBERON:0003294!1.21e-08!6;UBERON:0010047!1.21e-08!6;UBERON:0000167!1.21e-08!6;UBERON:0001723!1.29e-08!3;UBERON:0001033!1.29e-08!3;UBERON:0010056!1.29e-08!3;UBERON:0001949!4.72e-08!3;UBERON:0000072!7.60e-08!46;UBERON:0001041!1.06e-07!98;UBERON:0003126!2.64e-07!7;UBERON:0001005!2.64e-07!7;UBERON:0002372!5.43e-07!1;UBERON:0001961!5.43e-07!1;UBERON:0001744!5.43e-07!1;UBERON:0001735!5.43e-07!1;UBERON:0001557!6.64e-07!19;UBERON:0007029!6.80e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.60e-18;2!UBERON:0007771;3.60e-18;2!UBERON:0003297;3.60e-18;2!UBERON:0001821;3.60e-18;2!UBERON:0003487;3.60e-18;2!UBERON:0001820;3.60e-18;2!UBERON:0001723;3.97e-13;3!UBERON:0001033;3.97e-13;3!UBERON:0000165;6.15e-11;28!UBERON:0005795;1.89e-10;1!UBERON:0002372;2.84e-10;1!UBERON:0001961;2.84e-10;1!UBERON:0001744;2.84e-10;1!UBERON:0001042;2.84e-10;1!UBERON:0001735;2.84e-10;1!UBERON:0007029;3.88e-10;1!UBERON:0000014;8.44e-10;4!UBERON:0001003;1.75e-09;15!UBERON:0007376;1.75e-09;15!UBERON:0000365;9.38e-08;5!UBERON:0000161;1.49e-07;19!UBERON:0000166;1.49e-07;19!UBERON:0000486;5.72e-07;12!UBERON:0000002;6.85e-07;6!UBERON:0001560;6.85e-07;6!UBERON:0010371;7.33e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.89e-18,2;UBERON:0007771,4.89e-18,2;UBERON:0003297,4.89e-18,2;UBERON:0001821,4.89e-18,2;UBERON:0003487,4.89e-18,2;UBERON:0001820,4.89e-18,2;UBERON:0005089,4.89e-18,2;UBERON:0005088,4.89e-18,2;UBERON:0000166,4.81e-14,22;UBERON:0001723,4.09e-13,3;UBERON:0001033,4.09e-13,3;UBERON:0010056,4.09e-13,3;UBERON:0003102,1.00e-10,99;UBERON:0000165,1.52e-10,29;UBERON:0000930,1.52e-10,29;UBERON:0002372,2.59e-10,1;UBERON:0001961,2.59e-10,1;UBERON:0001744,2.59e-10,1;UBERON:0001735,2.59e-10,1;UBERON:0007029,3.71e-10,1;UBERON:0000014,8.63e-10,4;UBERON:0001003,1.90e-09,15;UBERON:0007376,1.90e-09,15;UBERON:0007383,1.90e-09,15;UBERON:0001042,1.06e-08,10;UBERON:0009145,1.06e-08,10;UBERON:0000161,2.12e-08,36;UBERON:0001444,4.50e-08,49;UBERON:0000153,5.06e-08,62;UBERON:0007811,5.06e-08,62;UBERON:0006562,5.93e-08,11;UBERON:0000365,8.91e-08,5;UBERON:0000033,5.75e-07,56;UBERON:0000002,6.85e-07,6;UBERON:0001560,6.85e-07,6;UBERON:0001044,9.97e-07,6;UBERON:0003293,9.97e-07,6;UBERON:0003294,9.97e-07,6;UBERON:0010047,9.97e-07,6;UBERON:0000167,9.97e-07,6 | |||
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|short_description=p1@SDR9C7 | |||
}} | }} |
Latest revision as of 12:27, 19 September 2015
Short description: | p1@SDR9C7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SDR9C7_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 0bp_to_ENST00000293502, NM_148897_5end |
EntrezGene: | SDR9C7 |
HGNC: | 29958 |
UniProt: | Q8NEX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 8.89e-28 | 5 |
protein secreting cell | 3.32e-23 | 6 |
sebum secreting cell | 4.89e-18 | 2 |
epithelial cell of sweat gland | 4.89e-18 | 2 |
epithelial cell of skin gland | 4.89e-18 | 2 |
acinar cell of sebaceous gland | 4.89e-18 | 2 |
glandular epithelial cell | 1.45e-15 | 9 |
acinar cell of salivary gland | 1.33e-12 | 3 |
general ecto-epithelial cell | 4.43e-10 | 14 |
transitional epithelial cell | 1.66e-09 | 4 |
urothelial cell | 1.66e-09 | 4 |
epidermal cell | 3.50e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.10e-10 | 1 |
keratoacanthoma | 3.10e-10 | 1 |