FFCP PHASE1:Hg19::chr4:74486082..74486085,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166824 | |EntrezGene=166824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20796 | |HGNC=20796 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000395777_5end | |association_with_transcript=43bp_to_ENST00000395777_5end | ||
|cluster_id=chr4:74486082..74486085,- | |||
|coexpression_cluster_id=C1523 | |||
|description=CAGE_peak_9_at_RASSF6_5end | |description=CAGE_peak_9_at_RASSF6_5end | ||
|id=chr4:74486082..74486085,- | |id=chr4:74486082..74486085,- | ||
|ontology_enrichment_celltype=CL:0000945!3.87e-12!24;CL:0000826!3.87e-12!24;CL:0000542!2.84e-08!53;CL:0000051!2.84e-08!53;CL:0000838!4.57e-07!52 | |ontology_enrichment_celltype=CL:0000945!3.87e-12!24;CL:0000826!3.87e-12!24;CL:0000542!2.84e-08!53;CL:0000051!2.84e-08!53;CL:0000838!4.57e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000785;3.10e-50;1!CL:0000819;3.10e-50;1!CL:0000945;2.06e-19;24!CL:0000542;4.13e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,6.58e-50,1;CL:0000785,9.18e-26,2;CL:0000955,9.18e-26,2;CL:0000818,9.18e-26,2;CL:0000954,9.18e-26,2;CL:0000816,9.18e-26,2;CL:0000945,2.13e-19,24;CL:0000826,2.13e-19,24;CL:0000817,1.12e-17,3;CL:0000838,1.83e-09,52;CL:0000542,2.66e-09,53;CL:0000051,2.66e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000954;6.30e-26;2!CL:0000051;4.13e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.41e-10!10;DOID:3493!2.29e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.10e-50;1!DOID:8675;3.10e-50;1!DOID:0060058;5.23e-45;10!DOID:2531;1.25e-07;51!DOID:0060083;1.25e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.58e-50,1;DOID:8675,6.58e-50,1;DOID:0060058,5.64e-45,10;DOID:2531,1.24e-09,51;DOID:0060083,1.24e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000974!8.66e-07!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@RASSF6 | |short_description=p9@RASSF6 | ||
}} | }} |
Latest revision as of 13:39, 18 September 2015
Short description: | p9@RASSF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RASSF6_5end |
Coexpression cluster: | C1523_diffuse_small_lymphoma_thymus_Burkitt_lymphangiectasia_b |
Association with transcript: | 43bp_to_ENST00000395777_5end |
EntrezGene: | RASSF6 |
HGNC: | 20796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 6.58e-50 | 1 |
mature B cell | 9.18e-26 | 2 |
pre-B-II cell | 9.18e-26 | 2 |
transitional stage B cell | 9.18e-26 | 2 |
small pre-B-II cell | 9.18e-26 | 2 |
immature B cell | 9.18e-26 | 2 |
lymphocyte of B lineage | 2.13e-19 | 24 |
pro-B cell | 2.13e-19 | 24 |
precursor B cell | 1.12e-17 | 3 |
lymphoid lineage restricted progenitor cell | 1.83e-09 | 52 |
lymphocyte | 2.66e-09 | 53 |
common lymphoid progenitor | 2.66e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.58e-50 | 1 |
lymphosarcoma | 6.58e-50 | 1 |
lymphoma | 5.64e-45 | 10 |
hematologic cancer | 1.24e-09 | 51 |
immune system cancer | 1.24e-09 | 51 |