FFCP PHASE1:Hg19::chr4:77908899..77908914,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55752 | |EntrezGene=55752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25589 | |HGNC=25589 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000512333_5end | |association_with_transcript=-26bp_to_ENST00000512333_5end | ||
|cluster_id=chr4:77908899..77908914,+ | |||
|coexpression_cluster_id=C4426 | |||
|description=CAGE_peak_9_at_SEPT11_5end | |description=CAGE_peak_9_at_SEPT11_5end | ||
|id=chr4:77908899..77908914,+ | |id=chr4:77908899..77908914,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.59e-31!180;CL:0000048!9.81e-17!430;CL:0000723!4.89e-16!436;CL:0000057!7.14e-16!75;CL:0000187!8.77e-16!54;CL:0000393!1.57e-15!60;CL:0000211!1.57e-15!60;CL:0000680!1.95e-15!57;CL:0000056!1.95e-15!57;CL:0000355!1.95e-15!57;CL:0000034!3.85e-15!444;CL:0000183!1.29e-13!59;CL:0000192!2.68e-13!42;CL:0000514!2.68e-13!42;CL:0002371!1.26e-09!591;CL:0000144!2.95e-09!625;CL:0002620!3.23e-09!23;CL:0002334!3.75e-08!12;CL:0000359!5.79e-08!32;CL:1000306!3.92e-07!4;CL:0002547!3.92e-07!4 | |ontology_enrichment_celltype=CL:0000055!3.59e-31!180;CL:0000048!9.81e-17!430;CL:0000723!4.89e-16!436;CL:0000057!7.14e-16!75;CL:0000187!8.77e-16!54;CL:0000393!1.57e-15!60;CL:0000211!1.57e-15!60;CL:0000680!1.95e-15!57;CL:0000056!1.95e-15!57;CL:0000355!1.95e-15!57;CL:0000034!3.85e-15!444;CL:0000183!1.29e-13!59;CL:0000192!2.68e-13!42;CL:0000514!2.68e-13!42;CL:0002371!1.26e-09!591;CL:0000144!2.95e-09!625;CL:0002620!3.23e-09!23;CL:0002334!3.75e-08!12;CL:0000359!5.79e-08!32;CL:1000306!3.92e-07!4;CL:0002547!3.92e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000306;3.74e-17;4!CL:0002547;3.74e-17;4!CL:0002580;2.24e-13;3!CL:0002620;2.32e-12;23!CL:0002334;1.03e-08;12!CL:0002579;9.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.38e-17,4;CL:0002547,3.38e-17,4;CL:0000057,1.37e-16,76;CL:0002580,2.44e-13,3;CL:0002620,1.85e-12,23;CL:0002334,1.07e-08,12;CL:0000048,2.75e-07,427;CL:0000723,4.63e-07,433;CL:0000034,9.07e-07,441;CL:0002579,9.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.70e-08!5;DOID:450!4.70e-08!5;DOID:66!4.70e-08!5;DOID:423!4.70e-08!5;DOID:0080000!4.70e-08!5;DOID:11722!4.70e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.71e-19;5!DOID:450;1.71e-19;5!DOID:66;1.71e-19;5!DOID:423;1.71e-19;5!DOID:0080000;1.71e-19;5!DOID:11722;1.71e-19;5!DOID:1192;8.01e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.98e-20,5;DOID:450,8.98e-20,5;DOID:66,8.98e-20,5;DOID:423,8.98e-20,5;DOID:0080000,8.98e-20,5;DOID:11722,8.98e-20,5;DOID:1192,7.91e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!5.84e-14!63;UBERON:0001015!5.84e-14!63;UBERON:0000383!5.84e-14!63;UBERON:0001134!9.13e-14!61;UBERON:0002036!9.13e-14!61;UBERON:0003082!9.13e-14!61;UBERON:0000914!2.69e-12!83;UBERON:0002329!2.69e-12!83;UBERON:0003077!2.69e-12!83;UBERON:0003059!2.69e-12!83;UBERON:0007282!2.69e-12!83;UBERON:0009618!2.69e-12!83;UBERON:0007285!2.69e-12!83;UBERON:0004290!1.10e-11!70;UBERON:0000486!3.92e-10!82;UBERON:0005256!3.74e-08!143;UBERON:0000490!2.77e-07!138;UBERON:0000415!3.92e-07!4;UBERON:0007240!3.92e-07!4;UBERON:0005742!3.92e-07!4;UBERON:0005734!3.92e-07!4;UBERON:0004664!3.92e-07!4;UBERON:0004663!3.92e-07!4;UBERON:0002384!5.98e-07!375;UBERON:0001135!6.59e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.74e-17;4!UBERON:0000415;3.74e-17;4!UBERON:0007240;3.74e-17;4!UBERON:0005742;3.74e-17;4!UBERON:0005734;3.74e-17;4!UBERON:0004664;3.74e-17;4!UBERON:0004663;3.74e-17;4!UBERON:0004457;1.50e-07;9!UBERON:0000042;1.50e-07;9!UBERON:0002097;4.43e-07;41!UBERON:0003688;5.61e-07;6!UBERON:0002358;5.61e-07;6!UBERON:0003684;5.61e-07;6!UBERON:0001178;5.61e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.38e-17,4;UBERON:0007240,3.38e-17,4;UBERON:0005742,3.38e-17,4;UBERON:0005734,3.38e-17,4;UBERON:0004664,3.38e-17,4;UBERON:0004663,3.38e-17,4;UBERON:0004797,7.56e-10,7;UBERON:0002097,7.21e-08,41;UBERON:0003688,5.61e-07,6;UBERON:0002358,5.61e-07,6;UBERON:0003684,5.61e-07,6;UBERON:0001178,5.61e-07,6;UBERON:0002199,8.18e-07,46;UBERON:0002416,8.18e-07,46 | |||
|phase1_expression=0.908391896352783,0.428201047781966,3.38290569830331,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0.975865597581014,0,0,0.626909442956176,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,1.00267582127178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4303548889923,4.17880688493113,6.09082231740807,3.72887606973458,2.4826786753885,0.560677600142307,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0.877955241761676,0.30648779579902,0.150238058906597,0.907457465280168,1.07633781413317,3.63047560991565,3.81477422087211,1.50045548042201,1.8549455262919,2.83404594050192,2.60563598864226,0.675105328965065,1.07180705677318,0.757301322732344,5.61504381718026,0.484938170456436,0.355009592516614,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0,1.71573592389777,0,0,0,0.710783897485092,0,0,0,0,0,0,0,4.31324739884849,3.44585807502342,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.831883446123229,3.39015078714607,2.20783381047509,0.468565659970853,0.902838299183157,0,0,0.664225598535437,1.65932251687533,0.60818530127658,0,0,0,0,0,0,0,0,8.93188108147597,2.14846762603287,4.77122160536225,10.6355493882232,0.511707249066704,4.18220194973379,0,0,0.532685175939381,0.328508624055237,0,0.116210378459959,0,0,0,2.98517565227978,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.742585499285292,0,0,3.21367859688319,0.48335359146061,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,1.33548053470106,0,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.949138274156178,0.38126038784765,0.255897791311334,0,0.318203247925937,0,1.07923474549989,0.54907405947211,1.17812402345686,0.404364963146632,0,0,0.975267478179181,0.243713489631284,0,0.272999822815972,3.11091950298168,0,0,0.66343897524122,0,0,1.31178950409327,0,0.6196469961995,0,0.717056761020258,2.35797698431491,0.35667105148125,0,0.211107635297664,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.511343412510774,0.123084805461069,4.0435146396035,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.407712618220842,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,0.554805861502613,0.189403005275089,0.754703705257725,0,0.457680136793847,0.302461847526478,0.621748802331122,0,0,0,0.465788870628778,0.414706207840855,0.797525143673985,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0.400027764663154,3.09056134664514,3.03074539889327,2.52369796457302,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,6.67809136372179,0,0,2.46873160583479,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0.245148321753905,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,1.38652688589425,3.02838593486652,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0.908391896352783,0.428201047781966,3.38290569830331,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0.975865597581014,0,0,0.626909442956176,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,1.00267582127178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4303548889923,4.17880688493113,6.09082231740807,3.72887606973458,2.4826786753885,0.560677600142307,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0.877955241761676,0.30648779579902,0.150238058906597,0.907457465280168,1.07633781413317,3.63047560991565,3.81477422087211,1.50045548042201,1.8549455262919,2.83404594050192,2.60563598864226,0.675105328965065,1.07180705677318,0.757301322732344,5.61504381718026,0.484938170456436,0.355009592516614,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0,1.71573592389777,0,0,0,0.710783897485092,0,0,0,0,0,0,0,4.31324739884849,3.44585807502342,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.831883446123229,3.39015078714607,2.20783381047509,0.468565659970853,0.902838299183157,0,0,0.664225598535437,1.65932251687533,0.60818530127658,0,0,0,0,0,0,0,0,8.93188108147597,2.14846762603287,4.77122160536225,10.6355493882232,0.511707249066704,4.18220194973379,0,0,0.532685175939381,0.328508624055237,0,0.116210378459959,0,0,0,2.98517565227978,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.742585499285292,0,0,3.21367859688319,0.48335359146061,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,1.33548053470106,0,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.949138274156178,0.38126038784765,0.255897791311334,0,0.318203247925937,0,1.07923474549989,0.54907405947211,1.17812402345686,0.404364963146632,0,0,0.975267478179181,0.243713489631284,0,0.272999822815972,3.11091950298168,0,0,0.66343897524122,0,0,1.31178950409327,0,0.6196469961995,0,0.717056761020258,2.35797698431491,0.35667105148125,0,0.211107635297664,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.511343412510774,0.123084805461069,4.0435146396035,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.407712618220842,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,0.554805861502613,0.189403005275089,0.754703705257725,0,0.457680136793847,0.302461847526478,0.621748802331122,0,0,0,0.465788870628778,0.414706207840855,0.797525143673985,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0.400027764663154,3.09056134664514,3.03074539889327,2.52369796457302,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,6.67809136372179,0,0,2.46873160583479,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0.245148321753905,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,1.38652688589425,3.02838593486652,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p9@SEPT11 | |short_description=p9@SEPT11 | ||
}} | }} |
Latest revision as of 18:36, 18 September 2015
Short description: | p9@SEPT11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEPT11_5end |
Coexpression cluster: | C4426_Ewing_Preadipocyte_Fibroblast_basal_neurofibroma_Multipotent_Adipocyte |
Association with transcript: | -26bp_to_ENST00000512333_5end |
EntrezGene: | SEPT11 |
HGNC: | 25589 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.38e-17 | 4 |
fibroblast of the aortic adventitia | 3.38e-17 | 4 |
fibroblast | 1.37e-16 | 76 |
preadipocyte of the breast | 2.44e-13 | 3 |
skin fibroblast | 1.85e-12 | 23 |
preadipocyte | 1.07e-08 | 12 |
multi fate stem cell | 2.75e-07 | 427 |
somatic stem cell | 4.63e-07 | 433 |
stem cell | 9.07e-07 | 441 |
omentum preadipocyte | 9.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.38e-17 | 4 |
tunica adventitia of artery | 3.38e-17 | 4 |
adventitia | 3.38e-17 | 4 |
tunica adventitia of blood vessel | 3.38e-17 | 4 |
aorta tunica adventitia | 3.38e-17 | 4 |
aorta wall | 3.38e-17 | 4 |
blood vessel layer | 7.56e-10 | 7 |
skin of body | 7.21e-08 | 41 |
omentum | 5.61e-07 | 6 |
peritoneum | 5.61e-07 | 6 |
abdominal cavity | 5.61e-07 | 6 |
visceral peritoneum | 5.61e-07 | 6 |
integument | 8.18e-07 | 46 |
integumental system | 8.18e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.98e-20 | 5 |
myotonic disease | 8.98e-20 | 5 |
muscle tissue disease | 8.98e-20 | 5 |
myopathy | 8.98e-20 | 5 |
muscular disease | 8.98e-20 | 5 |
myotonic dystrophy | 8.98e-20 | 5 |
peripheral nervous system neoplasm | 7.91e-07 | 3 |