FFCP PHASE1:Hg19::chr12:6485052..6485071,-: Difference between revisions
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|id=chr12:6485052..6485071,-
|short_description=p21@SCNN1A
|description=CAGE_peak_21_at_SCNN1A_5end
|association_with_transcript=122bp_to_ENST00000536411_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_ENST00000536411_5end | |||
|cluster_id=chr12:6485052..6485071,- | |||
|description=CAGE_peak_21_at_SCNN1A_5end | |||
|id=chr12:6485052..6485071,- | |||
|ontology_enrichment_celltype=CL:0000066!1.06e-13!254;CL:0002322!1.99e-09!5;CL:0000064!8.93e-07!3;CL:0005012!8.93e-07!3;CL:0000067!8.93e-07!3;CL:0002304!8.93e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1001319;9.98e-16;1!CL:1000600;9.98e-16;1!CL:0000650;2.57e-08;2!CL:1000500;2.57e-08;2!CL:1000618;2.57e-08;2!CL:1001318;2.57e-08;2!CL:0002173;2.57e-08;2!CL:1000415;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.46e-16,1;CL:1000600,7.46e-16,1;CL:1000415,2.15e-08,2;CL:0000650,3.08e-08,2;CL:1000500,3.08e-08,2;CL:1000618,3.08e-08,2;CL:1001318,3.08e-08,2;CL:0002173,3.08e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.26e-14!106;DOID:0050687!9.90e-12!143;DOID:162!5.21e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.61e-08;2!DOID:4468;1.61e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.50e-08,2;DOID:4468,1.61e-08,2;DOID:0050687,3.47e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000466!8.19e-13!126;UBERON:0005177!8.68e-13!107;UBERON:0000464!2.34e-10!104;UBERON:0000058!2.83e-09!26;UBERON:0000488!1.62e-08!4;UBERON:0002203!1.73e-08!6;UBERON:0001768!1.73e-08!6;UBERON:0000489!2.44e-08!32;UBERON:0001048!3.21e-08!168;UBERON:0005911!3.22e-08!82;UBERON:0003886!2.26e-07!63;UBERON:0002113!2.29e-07!27;UBERON:0003918!2.29e-07!27;UBERON:0005095!2.29e-07!27;UBERON:0007687!2.29e-07!27;UBERON:0006554!4.49e-07!44;UBERON:0000077!4.80e-07!130;UBERON:0004921!5.14e-07!129;UBERON:0004185!5.14e-07!129;UBERON:0001007!5.15e-07!155;UBERON:0001555!5.15e-07!155;UBERON:0007026!5.15e-07!155;UBERON:0004119!7.70e-07!169;UBERON:0000925!7.70e-07!169;UBERON:0006595!7.70e-07!169;UBERON:0001008!7.70e-07!45;UBERON:0001778!8.93e-07!3;UBERON:0001775!8.93e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;9.98e-16;1!UBERON:0001256;9.98e-16;1!UBERON:0001259;9.98e-16;1!UBERON:0001255;1.61e-08;2!UBERON:0004903;1.61e-08;2!UBERON:0001556;1.61e-08;2!UBERON:0002173;1.61e-08;2!UBERON:0002186;1.61e-08;2!UBERON:0003567;2.57e-08;2!UBERON:0003838;2.57e-08;2!UBERON:0003586;2.57e-08;2!UBERON:0005169;2.57e-08;2!UBERON:0002321;2.57e-08;2!UBERON:0005215;2.57e-08;2!UBERON:0002303;2.57e-08;2!UBERON:0002319;2.57e-08;2!UBERON:0000489;3.90e-08;29!UBERON:0006554;7.16e-08;30!UBERON:0001008;7.16e-08;30!UBERON:0002075;1.19e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.46e-16,1;UBERON:0001256,7.46e-16,1;UBERON:0001259,7.46e-16,1;UBERON:0001255,1.39e-08,2;UBERON:0001556,1.39e-08,2;UBERON:0004903,1.50e-08,2;UBERON:0002173,1.50e-08,2;UBERON:0002186,1.50e-08,2;UBERON:0005177,2.80e-08,101;UBERON:0003567,3.08e-08,2;UBERON:0003838,3.08e-08,2;UBERON:0003586,3.08e-08,2;UBERON:0005169,3.08e-08,2;UBERON:0002321,3.08e-08,2;UBERON:0005215,3.08e-08,2;UBERON:0002303,3.08e-08,2;UBERON:0002319,3.08e-08,2;UBERON:0002075,1.11e-07,18;UBERON:0000489,1.27e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0.812839312631559,1.00337954770971,0.509752546090077,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,2.44849212238722,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0,1.19472429772959,1.42304773014896,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.164831716762333,0.404421263125109,0.688992370603241,0,0,0,0.482259445395058,0.137539436597234,0.415440338029185,0,0,0,0,0.630445658393585,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,2.11444506695002,0.640724475406168,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,2.36519416914302,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0.443568258651136,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0.0714765441766563,0,2.20858708199438,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,2.85686301769052,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0.534434810531121,0.275684698604535,0,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,1.65482611523229,0,0,0,0,0.932388670104793,0,2.60490459555118,0,0,0.269475606319761,0,0,0,0,0,0 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| ||
|short_description=p21@SCNN1A | |||
}} | }} |
Latest revision as of 20:54, 19 September 2015
Short description: | p21@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SCNN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_ENST00000536411_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.46e-16 | 1 |
lower urinary tract cell | 7.46e-16 | 1 |
epithelial cell of gall bladder | 2.15e-08 | 2 |
mesangial cell | 3.08e-08 | 2 |
kidney interstitial cell | 3.08e-08 | 2 |
juxtaglomerular complex cell | 3.08e-08 | 2 |
renal interstitial pericyte | 3.08e-08 | 2 |
extraglomerular mesangial cell | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.46e-16 | 1 |
wall of urinary bladder | 7.46e-16 | 1 |
mucosa of urinary bladder | 7.46e-16 | 1 |
urinary bladder | 1.39e-08 | 2 |
lower urinary tract | 1.39e-08 | 2 |
bronchoalveolar duct junction | 1.50e-08 | 2 |
alveolar duct | 1.50e-08 | 2 |
bronchiole | 1.50e-08 | 2 |
trunk region element | 2.80e-08 | 101 |
abdomen connective tissue | 3.08e-08 | 2 |
abdominal segment connective tissue | 3.08e-08 | 2 |
trunk connective tissue | 3.08e-08 | 2 |
interstitial tissue | 3.08e-08 | 2 |
extraglomerular mesangium | 3.08e-08 | 2 |
kidney interstitium | 3.08e-08 | 2 |
juxtaglomerular apparatus | 3.08e-08 | 2 |
mesangium | 3.08e-08 | 2 |
viscus | 1.11e-07 | 18 |
cavitated compound organ | 1.27e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.50e-08 | 2 |
clear cell adenocarcinoma | 1.61e-08 | 2 |
cell type cancer | 3.47e-07 | 143 |