FFCP PHASE1:Hg19::chr1:21428051..21428055,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:21428051..21428055,- | |||
|description=CAGE_peak_at_chr1:21428051..21428055,- | |description=CAGE_peak_at_chr1:21428051..21428055,- | ||
|id=chr1:21428051..21428055,- | |id=chr1:21428051..21428055,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;6.96e-10;3!CL:0000094;5.61e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.80e-10,3;CL:0000094,4.22e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0010115;8.77e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;8.77e-08;1!DOID:3151;8.77e-08;1!DOID:1357;8.77e-08;1!DOID:3149;8.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.10e-08,1;DOID:1357,9.10e-08,1;DOID:3151,1.99e-07,1;DOID:3149,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.52e-17!115;UBERON:0001049!3.57e-12!57;UBERON:0005068!3.57e-12!57;UBERON:0006241!3.57e-12!57;UBERON:0007135!3.57e-12!57;UBERON:0000955!5.31e-12!69;UBERON:0006238!5.31e-12!69;UBERON:0002616!6.85e-12!59;UBERON:0001017!8.86e-12!82;UBERON:0005743!3.96e-11!86;UBERON:0000073!7.77e-11!94;UBERON:0001016!7.77e-11!94;UBERON:0002780!2.32e-09!41;UBERON:0001890!2.32e-09!41;UBERON:0006240!2.32e-09!41;UBERON:0002020!5.60e-09!34;UBERON:0003528!5.60e-09!34;UBERON:0001893!5.85e-09!34;UBERON:0003080!7.49e-09!42;UBERON:0002791!1.74e-08!33;UBERON:0001869!3.91e-08!32;UBERON:0002346!1.20e-07!90;UBERON:0003075!4.28e-07!86;UBERON:0007284!4.28e-07!86;UBERON:0000956!5.68e-07!25;UBERON:0000203!5.68e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.19e-08;1!UBERON:0002363;8.77e-08;1!UBERON:0006834;8.77e-08;1!UBERON:0001389;8.77e-08;1!UBERON:0001764;8.77e-08;1!UBERON:0000026;8.77e-08;1!UBERON:0008784;8.77e-08;1!UBERON:0006058;8.77e-08;1!UBERON:0003663;8.77e-08;1!UBERON:0004256;8.77e-08;1!UBERON:0001825;8.77e-08;1!UBERON:0004708;8.77e-08;1!UBERON:0002101;8.77e-08;1!UBERON:0004709;8.77e-08;1!UBERON:0002529;8.77e-08;1!UBERON:0010538;8.77e-08;1!UBERON:0003661;8.77e-08;1!UBERON:0010890;8.77e-08;1!UBERON:0002471;8.77e-08;1!UBERON:0001383;8.77e-08;1!UBERON:0010758;8.77e-08;1!UBERON:0010707;8.77e-08;1!UBERON:0000978;8.77e-08;1!UBERON:0002103;8.77e-08;1!UBERON:0001665;8.77e-08;1!UBERON:0003823;8.77e-08;1!UBERON:0000154;8.77e-08;1!UBERON:0010709;8.77e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.55e-08,1;UBERON:0005418,4.07e-08,1;UBERON:0001389,4.07e-08,1;UBERON:0000026,4.07e-08,1;UBERON:0008784,4.07e-08,1;UBERON:0006058,4.07e-08,1;UBERON:0003663,4.07e-08,1;UBERON:0004256,4.07e-08,1;UBERON:0004708,4.07e-08,1;UBERON:0002101,4.07e-08,1;UBERON:0004709,4.07e-08,1;UBERON:0002529,4.07e-08,1;UBERON:0010538,4.07e-08,1;UBERON:0003661,4.07e-08,1;UBERON:0010890,4.07e-08,1;UBERON:0002471,4.07e-08,1;UBERON:0001383,4.07e-08,1;UBERON:0004357,4.07e-08,1;UBERON:0004347,4.07e-08,1;UBERON:0005420,4.07e-08,1;UBERON:0005732,4.07e-08,1;UBERON:0010758,4.07e-08,1;UBERON:0010707,4.07e-08,1;UBERON:0000978,4.07e-08,1;UBERON:0002103,4.07e-08,1;UBERON:0001665,4.07e-08,1;UBERON:0003823,4.07e-08,1;UBERON:0000154,4.07e-08,1;UBERON:0010709,4.07e-08,1;UBERON:0005733,4.07e-08,1;UBERON:0005730,4.07e-08,1;UBERON:0002363,5.33e-08,1;UBERON:0007645,5.33e-08,1;UBERON:0007647,5.33e-08,1;UBERON:0010115,5.33e-08,1;UBERON:0001764,9.10e-08,1;UBERON:0001825,9.10e-08,1;UBERON:0006834,1.35e-07,1 | |||
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| ||
|short_description=p@chr1:21428051..21428055,- | |short_description=p@chr1:21428051..21428055,- | ||
}} | }} |
Latest revision as of 03:45, 28 July 2015
Short description: | p@chr1:21428051..21428055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:21428051..21428055, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.80e-10 | 3 |
granulocyte | 4.22e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.55e-08 | 1 |
hindlimb bud | 4.07e-08 | 1 |
soleus muscle | 4.07e-08 | 1 |
appendage | 4.07e-08 | 1 |
lower limb segment | 4.07e-08 | 1 |
multi-limb segment region | 4.07e-08 | 1 |
hindlimb muscle | 4.07e-08 | 1 |
hindlimb zeugopod muscle | 4.07e-08 | 1 |
paired limb/fin | 4.07e-08 | 1 |
limb | 4.07e-08 | 1 |
pelvic appendage | 4.07e-08 | 1 |
limb segment | 4.07e-08 | 1 |
paired limb/fin segment | 4.07e-08 | 1 |
limb muscle | 4.07e-08 | 1 |
pelvic complex muscle | 4.07e-08 | 1 |
zeugopod | 4.07e-08 | 1 |
muscle of leg | 4.07e-08 | 1 |
paired limb/fin bud | 4.07e-08 | 1 |
limb bud | 4.07e-08 | 1 |
pelvic appendage bud | 4.07e-08 | 1 |
limb/fin field | 4.07e-08 | 1 |
subdivision of organism along appendicular axis | 4.07e-08 | 1 |
appendage girdle complex | 4.07e-08 | 1 |
leg | 4.07e-08 | 1 |
hindlimb | 4.07e-08 | 1 |
triceps surae | 4.07e-08 | 1 |
hindlimb zeugopod | 4.07e-08 | 1 |
posterior region of body | 4.07e-08 | 1 |
pelvic complex | 4.07e-08 | 1 |
limb field | 4.07e-08 | 1 |
hindlimb/pelvic fin field | 4.07e-08 | 1 |
dura mater | 5.33e-08 | 1 |
future meninx | 5.33e-08 | 1 |
ectomeninx | 5.33e-08 | 1 |
future dura mater | 5.33e-08 | 1 |
maxillary sinus | 9.10e-08 | 1 |
paranasal sinus | 9.10e-08 | 1 |
uterus or analog | 1.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.10e-08 | 1 |
maxillary sinus cancer | 9.10e-08 | 1 |
skin squamous cell carcinoma | 1.99e-07 | 1 |
keratoacanthoma | 1.99e-07 | 1 |