FFCP PHASE1:Hg19::chr1:226129114..226129123,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7044 | |EntrezGene=7044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3122 | |HGNC=3122 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDM4,B4E332,O00292 | |UniProt=E9PDM4,B4E332,O00292 | ||
|association_with_transcript=-31bp_to_ENST00000420304,NM_001172425,NM_003240_5end | |association_with_transcript=-31bp_to_ENST00000420304,NM_001172425,NM_003240_5end | ||
|cluster_id=chr1:226129114..226129123,- | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_3_at_LEFTY2_5end | |description=CAGE_peak_3_at_LEFTY2_5end | ||
|id=chr1:226129114..226129123,- | |id=chr1:226129114..226129123,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.73e-11;10!UBERON:0009117;3.02e-11;10!UBERON:0005564;3.02e-11;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-13!115;UBERON:0006834!3.74e-10!1;UBERON:0007029!5.79e-10!1;UBERON:0002135!7.50e-10!1;UBERON:0001301!1.15e-09!1;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0000966!1.89e-07!5;UBERON:0005388!1.89e-07!5;UBERON:0001802!1.89e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;9.37e-99;1!UBERON:0003134;3.96e-11;33!UBERON:0000474;1.59e-09;37!UBERON:0003100;3.69e-09;41!UBERON:0000992;5.70e-09;13!UBERON:0003133;1.92e-07;44!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,9.37e-99,1;UBERON:0003134,5.76e-12,37;UBERON:0000474,5.76e-12,37;UBERON:0003100,6.32e-11,41;UBERON:0003133,1.62e-09,48;UBERON:0000992,5.70e-09,13;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
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|short_description=p3@LEFTY2 | |short_description=p3@LEFTY2 | ||
}} | }} |
Latest revision as of 00:57, 16 September 2015
Short description: | p3@LEFTY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LEFTY2_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | -31bp_to_ENST00000420304, NM_001172425, NM_003240_5end |
EntrezGene: | LEFTY2 |
HGNC: | 3122 |
UniProt: | E9PDM4B4E332O00292 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 9.37e-99 | 1 |
female reproductive organ | 5.76e-12 | 37 |
female reproductive system | 5.76e-12 | 37 |
female organism | 6.32e-11 | 41 |
reproductive organ | 1.62e-09 | 48 |
female gonad | 5.70e-09 | 13 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |