FFCP PHASE1:Hg19::chr5:137071845..137071852,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26249 | |EntrezGene=26249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6354 | |HGNC=6354 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UH77,Q8N4I8 | |UniProt=Q9UH77,Q8N4I8 | ||
|association_with_transcript=-66bp_to_ENST00000309755,NM_017415,uc010jek.2,uc010jem.1_5end | |association_with_transcript=-66bp_to_ENST00000309755,NM_017415,uc010jek.2,uc010jem.1_5end | ||
|cluster_id=chr5:137071845..137071852,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_10_at_KLHL3_5end | |description=CAGE_peak_10_at_KLHL3_5end | ||
|id=chr5:137071845..137071852,- | |id=chr5:137071845..137071852,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.79e-88;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-30!115;UBERON:0001049!1.03e-20!57;UBERON:0005068!1.03e-20!57;UBERON:0006241!1.03e-20!57;UBERON:0007135!1.03e-20!57;UBERON:0003075!4.29e-18!86;UBERON:0007284!4.29e-18!86;UBERON:0002346!7.17e-17!90;UBERON:0001893!1.18e-16!34;UBERON:0002616!1.58e-16!59;UBERON:0002780!1.63e-16!41;UBERON:0001890!1.63e-16!41;UBERON:0006240!1.63e-16!41;UBERON:0001869!4.75e-16!32;UBERON:0003080!5.47e-16!42;UBERON:0002791!3.14e-15!33;UBERON:0002619!6.07e-15!22;UBERON:0002020!1.19e-14!34;UBERON:0003528!1.19e-14!34;UBERON:0001950!1.91e-14!20;UBERON:0005743!2.65e-14!86;UBERON:0001017!3.09e-14!82;UBERON:0000955!3.67e-14!69;UBERON:0006238!3.67e-14!69;UBERON:0000956!8.76e-13!25;UBERON:0000203!8.76e-13!25;UBERON:0003056!1.26e-12!61;UBERON:0000073!3.50e-12!94;UBERON:0001016!3.50e-12!94;UBERON:0000153!2.52e-11!129;UBERON:0007811!2.52e-11!129;UBERON:0001872!3.05e-11!5;UBERON:0000033!8.37e-10!123;UBERON:0004121!2.48e-08!169;UBERON:0000924!6.31e-08!173;UBERON:0006601!6.31e-08!173;UBERON:0004111!7.46e-08!241;UBERON:0000064!3.34e-07!219;UBERON:0000477!5.17e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.09e-44;6!UBERON:0002680;2.87e-30;9!UBERON:0001895;2.87e-30;9!UBERON:0004733;4.86e-23;12!UBERON:0002028;4.86e-23;12!UBERON:0004732;2.28e-21;13!UBERON:0002021;1.71e-14;5!UBERON:0000073;2.51e-07;53!UBERON:0002616;2.51e-07;53!UBERON:0000955;2.56e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0002680,2.66e-30,9;UBERON:0001895,2.66e-30,9;UBERON:0010092,2.66e-30,9;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0002021,1.83e-14,5;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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| ||
|short_description=p10@KLHL3 | |short_description=p10@KLHL3 | ||
}} | }} |
Latest revision as of 21:02, 24 September 2015
Short description: | p10@KLHL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_KLHL3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -66bp_to_ENST00000309755, NM_017415, uc010jek.2, uc010jem.1_5end |
EntrezGene: | KLHL3 |
HGNC: | 6354 |
UniProt: | Q9UH77Q8N4I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
occipital lobe | 1.83e-14 | 5 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |