FFCP PHASE1:Hg19::chr12:69747723..69747752,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:69747723..69747752,-
|short_description=p1@ENST00000548900
|description=CAGE_peak_1_at_ENST00000548900_5end
|association_with_transcript=252bp_to_ENST0000...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=252bp_to_ENST00000548900_5end | |||
|cluster_id=chr12:69747723..69747752,- | |||
|coexpression_cluster_id=C625 | |||
|description=CAGE_peak_1_at_ENST00000548900_5end | |||
|id=chr12:69747723..69747752,- | |||
|ontology_enrichment_celltype=CL:0002194!1.42e-79!63;CL:0000576!1.42e-79!63;CL:0000040!1.42e-79!63;CL:0000559!1.42e-79!63;CL:0002009!1.30e-76!65;CL:0000766!2.70e-71!76;CL:0000839!6.02e-70!70;CL:0002057!1.74e-69!42;CL:0000557!1.00e-68!71;CL:0000860!6.49e-64!45;CL:0000763!1.43e-51!112;CL:0000049!1.43e-51!112;CL:0002087!4.58e-47!119;CL:0000738!1.49e-43!140;CL:0000037!9.78e-40!172;CL:0000566!9.78e-40!172;CL:0002031!2.51e-39!124;CL:0000988!2.11e-36!182;CL:0002032!4.89e-35!165;CL:0000837!4.89e-35!165;CL:0002393!6.75e-17!9;CL:0002397!6.75e-17!9;CL:0000134!6.41e-11!358;CL:0002320!2.39e-10!365;CL:0000219!2.30e-08!390;CL:0000235!8.36e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.42e-63;39!CL:0000234;5.42e-63;39!CL:0000860;6.24e-61;33!CL:0002057;6.24e-61;33!CL:0000576;1.79e-50;48!CL:0000766;2.21e-39;69!CL:0000763;2.62e-18;100!CL:0002393;1.66e-14;6!CL:0002397;1.66e-14;6!CL:0000235;2.58e-14;6!CL:0002087;7.57e-14;104!CL:0000738;5.13e-11;136!CL:0000767;4.28e-10;3!CL:0000988;4.56e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.42e-97,48;CL:0000234,8.42e-97,48;CL:0002194,1.38e-92,59;CL:0000576,1.38e-92,59;CL:0000040,1.38e-92,59;CL:0000559,1.38e-92,59;CL:0002009,3.00e-89,61;CL:0000766,1.56e-85,72;CL:0000860,2.77e-83,42;CL:0002057,2.77e-83,42;CL:0000839,8.88e-82,66;CL:0000557,2.05e-80,67;CL:0000763,4.19e-56,108;CL:0000049,4.19e-56,108;CL:0002087,2.67e-47,115;CL:0000738,1.66e-44,136;CL:0002031,1.93e-40,120;CL:0000037,2.01e-37,168;CL:0000988,6.22e-35,177;CL:0002032,5.20e-34,161;CL:0000837,5.20e-34,161;CL:0002393,7.08e-18,9;CL:0002397,7.08e-18,9;CL:0000235,2.52e-14,6;CL:0000134,1.14e-11,354;CL:0002320,3.21e-11,361;CL:0000767,6.48e-10,3;CL:0000219,1.21e-09,386;CL:0000034,9.12e-08,441;CL:0000048,9.82e-08,427;CL:0000723,1.79e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.35e-61;42!CL:0000049;1.90e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.33e-75!102;UBERON:0003061!6.33e-75!102;UBERON:0002193!2.33e-68!112;UBERON:0002371!9.81e-62!80;UBERON:0001474!3.15e-56!86;UBERON:0002405!9.72e-49!115;UBERON:0004765!2.53e-45!101;UBERON:0001434!2.53e-45!101;UBERON:0003081!1.07e-25!216;UBERON:0002204!9.14e-22!167;UBERON:0000178!2.57e-15!15;UBERON:0000179!2.57e-15!15;UBERON:0000463!2.57e-15!15;UBERON:0002384!1.42e-09!375;UBERON:0000926!4.77e-09!448;UBERON:0004120!4.77e-09!448;UBERON:0006603!4.77e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.34e-07;2!UBERON:0000178;2.97e-07;15!UBERON:0000179;2.97e-07;15!UBERON:0000463;2.97e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.11e-73,76;UBERON:0002390,7.95e-73,98;UBERON:0003061,7.95e-73,98;UBERON:0001474,2.67e-67,82;UBERON:0002193,4.64e-65,108;UBERON:0004765,2.05e-60,90;UBERON:0002405,3.91e-58,93;UBERON:0001434,2.42e-53,100;UBERON:0003081,1.08e-30,203;UBERON:0002204,1.07e-27,167;UBERON:0000926,1.38e-15,315;UBERON:0004120,1.38e-15,315;UBERON:0006603,1.38e-15,315;UBERON:0002384,1.31e-10,371;UBERON:0003127,1.72e-07,2;UBERON:0000178,2.87e-07,15;UBERON:0000179,2.87e-07,15;UBERON:0000463,2.87e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,2.01260960310899,0,0,0,0,0,3.22960483268332,4.43196326825502,0.401088894940283,5.20826089718044,1.79132379391939,1.29557466407592,0.77272670290256,2.61716829803216,2.26725566213286,2.66842467306598,2.09186133215116,0.822335776043652,1.54853185447552,5.75384784644301,2.0492856522328,4.02019790810595,4.48169384957604,1.29096936716765,0,2.44715041405386,0.272906150057846,2.47195832889593,6.12167784741805,1.28371610830437,1.27867425159808,1.64925650093358,2.19410023383795,4.68847225585964,5.22376629531451,1.13477044938228,0.622822248995575,6.28121663141858,0.521482918420201,7.60160956467908,4.23779651843358,0.736555271975129,2.21523671208619,5.91514801673437,2.55125159958052,11.740884148469,20.4438108686621,6.60778328502628,1.6072558669708,3.13514018115373,0.79566670879636,1.82664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,6.32121803460185,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.552700035571697,0.289803085735052,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57002133020152,1.74129737299267,0.664789802594326,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17055712783534,4.68008530278475,5.7966153292604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.8828556147351,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,3.57347663186684,6.58179636937911,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.957526850661834,0,0,0,0,0,0,0,0,0.201799707191048,1.27753871307098,0.343505344755765,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.26961417541674,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0.098150233615243,1.46301509978723,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0,0.435433495793923,0.342233301085281,0.0673520530145875,2.00822175099494,3.32660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,2.01260960310899,0,0,0,0,0,3.22960483268332,4.43196326825502,0.401088894940283,5.20826089718044,1.79132379391939,1.29557466407592,0.77272670290256,2.61716829803216,2.26725566213286,2.66842467306598,2.09186133215116,0.822335776043652,1.54853185447552,5.75384784644301,2.0492856522328,4.02019790810595,4.48169384957604,1.29096936716765,0,2.44715041405386,0.272906150057846,2.47195832889593,6.12167784741805,1.28371610830437,1.27867425159808,1.64925650093358,2.19410023383795,4.68847225585964,5.22376629531451,1.13477044938228,0.622822248995575,6.28121663141858,0.521482918420201,7.60160956467908,4.23779651843358,0.736555271975129,2.21523671208619,5.91514801673437,2.55125159958052,11.740884148469,20.4438108686621,6.60778328502628,1.6072558669708,3.13514018115373,0.79566670879636,1.82664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,6.32121803460185,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.552700035571697,0.289803085735052,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57002133020152,1.74129737299267,0.664789802594326,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17055712783534,4.68008530278475,5.7966153292604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.8828556147351,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,3.57347663186684,6.58179636937911,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.957526850661834,0,0,0,0,0,0,0,0,0.201799707191048,1.27753871307098,0.343505344755765,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.26961417541674,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0.098150233615243,1.46301509978723,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0,0.435433495793923,0.342233301085281,0.0673520530145875,2.00822175099494,3.32660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000548900 | |||
}} | }} |
Latest revision as of 11:54, 24 July 2015
Short description: | p1@ENST00000548900 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000548900_5end |
Coexpression cluster: | C625_CD14_Neutrophils_Basophils_CD14CD16_Peripheral_Eosinophils_Macrophage |
Association with transcript: | 252bp_to_ENST00000548900_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.11e-73 | 76 |
hematopoietic system | 7.95e-73 | 98 |
blood island | 7.95e-73 | 98 |
bone element | 2.67e-67 | 82 |
hemolymphoid system | 4.64e-65 | 108 |
skeletal element | 2.05e-60 | 90 |
immune system | 3.91e-58 | 93 |
skeletal system | 2.42e-53 | 100 |
lateral plate mesoderm | 1.08e-30 | 203 |
musculoskeletal system | 1.07e-27 | 167 |
mesoderm | 1.38e-15 | 315 |
mesoderm-derived structure | 1.38e-15 | 315 |
presumptive mesoderm | 1.38e-15 | 315 |
connective tissue | 1.31e-10 | 371 |
open tracheal system trachea | 1.72e-07 | 2 |
blood | 2.87e-07 | 15 |
haemolymphatic fluid | 2.87e-07 | 15 |
organism substance | 2.87e-07 | 15 |