FFCP PHASE1:Hg19::chr1:245025688..245025704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:245025688..245025704,- | |||
|coexpression_cluster_id=C1591 | |||
|description=CAGE_peak_at_chr1:245025688..245025704,- | |description=CAGE_peak_at_chr1:245025688..245025704,- | ||
|id=chr1:245025688..245025704,- | |id=chr1:245025688..245025704,- | ||
|ontology_enrichment_celltype=CL:0000037!2.36e-32!172;CL:0000566!2.36e-32!172;CL:0000988!1.01e-30!182;CL:0002032!8.65e-30!165;CL:0000837!8.65e-30!165;CL:0000738!6.00e-28!140;CL:0002087!2.32e-25!119;CL:0002031!2.92e-25!124;CL:0000763!8.92e-20!112;CL:0000049!8.92e-20!112;CL:0000766!1.90e-16!76;CL:0000839!3.33e-16!70;CL:0000557!9.33e-16!71;CL:0002009!3.24e-15!65;CL:0000860!6.62e-15!45;CL:0002194!7.07e-15!63;CL:0000576!7.07e-15!63;CL:0000040!7.07e-15!63;CL:0000559!7.07e-15!63;CL:0002057!6.60e-14!42;CL:0000542!2.31e-09!53;CL:0000051!2.31e-09!53;CL:0000838!5.25e-09!52 | |ontology_enrichment_celltype=CL:0000037!2.36e-32!172;CL:0000566!2.36e-32!172;CL:0000988!1.01e-30!182;CL:0002032!8.65e-30!165;CL:0000837!8.65e-30!165;CL:0000738!6.00e-28!140;CL:0002087!2.32e-25!119;CL:0002031!2.92e-25!124;CL:0000763!8.92e-20!112;CL:0000049!8.92e-20!112;CL:0000766!1.90e-16!76;CL:0000839!3.33e-16!70;CL:0000557!9.33e-16!71;CL:0002009!3.24e-15!65;CL:0000860!6.62e-15!45;CL:0002194!7.07e-15!63;CL:0000576!7.07e-15!63;CL:0000040!7.07e-15!63;CL:0000559!7.07e-15!63;CL:0002057!6.60e-14!42;CL:0000542!2.31e-09!53;CL:0000051!2.31e-09!53;CL:0000838!5.25e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.43e-11;33!CL:0002057;9.43e-11;33!CL:0000576;1.17e-09;48!CL:0000473;1.81e-08;39!CL:0000234;1.81e-08;39!CL:0000766;9.74e-08;69!CL:0002087;1.58e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.33e-31,168;CL:0000988,4.02e-30,177;CL:0002032,5.04e-29,161;CL:0000837,5.04e-29,161;CL:0000738,2.84e-27,136;CL:0002087,1.63e-24,115;CL:0002031,2.05e-24,120;CL:0000763,3.94e-19,108;CL:0000049,3.94e-19,108;CL:0000766,7.35e-16,72;CL:0000839,1.77e-15,66;CL:0000557,5.00e-15,67;CL:0002009,1.76e-14,61;CL:0000860,3.85e-14,42;CL:0002057,3.85e-14,42;CL:0002194,3.86e-14,59;CL:0000576,3.86e-14,59;CL:0000040,3.86e-14,59;CL:0000559,3.86e-14,59;CL:0000473,4.88e-13,48;CL:0000234,4.88e-13,48;CL:0000542,2.42e-09,53;CL:0000051,2.42e-09,53;CL:0000838,5.55e-09,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-10;42 | |||
|ontology_enrichment_disease=DOID:2531!8.04e-08!51;DOID:0060083!8.04e-08!51 | |ontology_enrichment_disease=DOID:2531!8.04e-08!51;DOID:0060083!8.04e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.32e-08,51;DOID:0060083,7.32e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-18!102;UBERON:0003061!1.20e-18!102;UBERON:0002193!1.22e-15!112;UBERON:0002371!3.99e-13!80;UBERON:0007023!6.32e-12!115;UBERON:0001474!7.96e-12!86;UBERON:0001049!7.81e-11!57;UBERON:0005068!7.81e-11!57;UBERON:0006241!7.81e-11!57;UBERON:0007135!7.81e-11!57;UBERON:0002780!1.19e-09!41;UBERON:0001890!1.19e-09!41;UBERON:0006240!1.19e-09!41;UBERON:0002405!1.21e-09!115;UBERON:0002020!1.97e-09!34;UBERON:0003528!1.97e-09!34;UBERON:0002791!4.60e-09!33;UBERON:0001893!4.79e-09!34;UBERON:0003080!7.74e-09!42;UBERON:0004765!1.59e-08!101;UBERON:0001434!1.59e-08!101;UBERON:0001869!2.46e-08!32;UBERON:0000955!5.95e-08!69;UBERON:0006238!5.95e-08!69;UBERON:0001017!6.86e-08!82;UBERON:0002616!1.08e-07!59;UBERON:0005743!4.22e-07!86;UBERON:0000073!8.72e-07!94;UBERON:0001016!8.72e-07!94 | |ontology_enrichment_uberon=UBERON:0002390!1.20e-18!102;UBERON:0003061!1.20e-18!102;UBERON:0002193!1.22e-15!112;UBERON:0002371!3.99e-13!80;UBERON:0007023!6.32e-12!115;UBERON:0001474!7.96e-12!86;UBERON:0001049!7.81e-11!57;UBERON:0005068!7.81e-11!57;UBERON:0006241!7.81e-11!57;UBERON:0007135!7.81e-11!57;UBERON:0002780!1.19e-09!41;UBERON:0001890!1.19e-09!41;UBERON:0006240!1.19e-09!41;UBERON:0002405!1.21e-09!115;UBERON:0002020!1.97e-09!34;UBERON:0003528!1.97e-09!34;UBERON:0002791!4.60e-09!33;UBERON:0001893!4.79e-09!34;UBERON:0003080!7.74e-09!42;UBERON:0004765!1.59e-08!101;UBERON:0001434!1.59e-08!101;UBERON:0001869!2.46e-08!32;UBERON:0000955!5.95e-08!69;UBERON:0006238!5.95e-08!69;UBERON:0001017!6.86e-08!82;UBERON:0002616!1.08e-07!59;UBERON:0005743!4.22e-07!86;UBERON:0000073!8.72e-07!94;UBERON:0001016!8.72e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.12e-08;32!UBERON:0003528;2.37e-08;34!UBERON:0002020;2.37e-08;34!UBERON:0001893;6.50e-08;34!UBERON:0001869;6.65e-08;32!UBERON:0002780;9.15e-08;41!UBERON:0001890;9.15e-08;41!UBERON:0000073;3.59e-07;53!UBERON:0002616;3.59e-07;53!UBERON:0000178;5.45e-07;15!UBERON:0000179;5.45e-07;15!UBERON:0000463;5.45e-07;15 | |||
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| ||
|short_description=p@chr1:245025688..245025704,- | |short_description=p@chr1:245025688..245025704,- | ||
}} | }} |
Latest revision as of 05:59, 28 July 2015
Short description: | p@chr1:245025688..245025704, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:245025688..245025704, - |
Coexpression cluster: | C1591_CD4_CD19_CD8_Natural_Neutrophils_peripheral_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.33e-31 | 168 |
hematopoietic cell | 4.02e-30 | 177 |
hematopoietic oligopotent progenitor cell | 5.04e-29 | 161 |
hematopoietic multipotent progenitor cell | 5.04e-29 | 161 |
leukocyte | 2.84e-27 | 136 |
nongranular leukocyte | 1.63e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 2.05e-24 | 120 |
myeloid cell | 3.94e-19 | 108 |
common myeloid progenitor | 3.94e-19 | 108 |
myeloid leukocyte | 7.35e-16 | 72 |
myeloid lineage restricted progenitor cell | 1.77e-15 | 66 |
granulocyte monocyte progenitor cell | 5.00e-15 | 67 |
macrophage dendritic cell progenitor | 1.76e-14 | 61 |
classical monocyte | 3.85e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.85e-14 | 42 |
monopoietic cell | 3.86e-14 | 59 |
monocyte | 3.86e-14 | 59 |
monoblast | 3.86e-14 | 59 |
promonocyte | 3.86e-14 | 59 |
defensive cell | 4.88e-13 | 48 |
phagocyte | 4.88e-13 | 48 |
lymphocyte | 2.42e-09 | 53 |
common lymphoid progenitor | 2.42e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.55e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.79e-18 | 98 |
blood island | 6.79e-18 | 98 |
hemolymphoid system | 5.14e-15 | 108 |
bone marrow | 2.43e-12 | 76 |
neural tube | 1.09e-11 | 56 |
neural rod | 1.09e-11 | 56 |
future spinal cord | 1.09e-11 | 56 |
neural keel | 1.09e-11 | 56 |
adult organism | 1.30e-11 | 114 |
bone element | 3.71e-11 | 82 |
regional part of nervous system | 1.03e-10 | 53 |
regional part of brain | 1.03e-10 | 53 |
immune system | 2.00e-10 | 93 |
regional part of forebrain | 8.37e-10 | 41 |
forebrain | 8.37e-10 | 41 |
anterior neural tube | 8.37e-10 | 41 |
future forebrain | 8.37e-10 | 41 |
brain grey matter | 1.40e-09 | 34 |
gray matter | 1.40e-09 | 34 |
telencephalon | 3.45e-09 | 34 |
regional part of telencephalon | 5.48e-09 | 32 |
cerebral hemisphere | 1.83e-08 | 32 |
brain | 2.08e-08 | 68 |
future brain | 2.08e-08 | 68 |
central nervous system | 2.74e-08 | 81 |
nervous system | 8.12e-08 | 89 |
skeletal element | 1.52e-07 | 90 |
neurectoderm | 4.83e-07 | 86 |
blood | 9.33e-07 | 15 |
haemolymphatic fluid | 9.33e-07 | 15 |
organism substance | 9.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.32e-08 | 51 |
immune system cancer | 7.32e-08 | 51 |