FFCP PHASE1:Hg19::chr5:175963959..175964017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22838 | |EntrezGene=22838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19180 | |HGNC=19180 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAW5 | |UniProt=D6RAW5 | ||
|association_with_transcript=279bp_to_ENST00000504160_5end | |association_with_transcript=279bp_to_ENST00000504160_5end | ||
|cluster_id=chr5:175963959..175964017,- | |||
|description=CAGE_peak_7_at_RNF44_5end | |description=CAGE_peak_7_at_RNF44_5end | ||
|id=chr5:175963959..175964017,- | |id=chr5:175963959..175964017,- | ||
|ontology_enrichment_celltype=CL:0000066!6.75e-27!254;CL:0000223!1.13e-10!59;CL:0002076!4.78e-10!43 | |ontology_enrichment_celltype=CL:0000066!6.75e-27!254;CL:0000223!1.13e-10!59;CL:0002076!4.78e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.29e-08;42!CL:0002251;2.96e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.74e-27,253;CL:0000223,1.95e-11,58;CL:0002076,5.06e-10,42;CL:0002251,3.73e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.32e-07;10!UBERON:0005564;2.32e-07;10!CL:0000223;7.86e-07;58 | |||
|ontology_enrichment_disease=DOID:162!6.88e-35!235;DOID:14566!1.82e-32!239;DOID:0050687!2.18e-24!143;DOID:305!8.76e-24!106;DOID:0050686!6.41e-16!137;DOID:8692!1.14e-09!31;DOID:1240!2.39e-09!39;DOID:2531!7.74e-09!51;DOID:0060083!7.74e-09!51;DOID:3095!3.13e-07!22;DOID:2994!3.13e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.54e-10;31!DOID:1240;3.54e-08;39!DOID:3095;6.01e-08;22!DOID:2994;6.01e-08;22!DOID:305;6.25e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.96e-36,235;DOID:14566,6.97e-34,239;DOID:0050687,4.35e-25,143;DOID:305,9.52e-24,106;DOID:0050686,9.21e-17,137;DOID:8692,3.22e-10,31;DOID:1240,1.43e-09,39;DOID:2531,1.67e-08,51;DOID:0060083,1.67e-08,51;DOID:3095,7.38e-08,22;DOID:2994,7.38e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000464!1.28e-07!104;UBERON:0005177!2.34e-07!107;UBERON:0004119!2.56e-07!169;UBERON:0000925!2.56e-07!169;UBERON:0006595!2.56e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.60e-09,101 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,2.7030733015166,6.28021051175185,2.40285509343189,2.63766978228454,0.990130823680373,0.994192127183747,0.672325146451775,0,2.19093027116212,0,0.984968464614303,1.83600622119828,4.07491137921514,0.85870796139317,1.91624195102038,2.00868223351684,1.98674854944673,1.9704141467987,1.96776953284198,0.393364276848904,0,2.01260960310899,0.919421224478927,2.10844143144775,1.47901604066715,0.774672005803016,1.84820002233648,1.76160263600908,0,0.802177789880567,0.868043482863407,0.447830948479849,0.32389366601898,0,0.436194716338694,0.377875943688809,0.242584061187816,0.929716147622738,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0.689491361473237,1.93645405075148,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,1.27867425159808,0,0.598390972864896,0,0.580418477257168,0,0,0.75374599577023,0,0.434377689410233,0,0,0,0.845021145247767,1.70083439972035,0,0.786300418025466,1.20141514273205,0.964353520182481,1.14005097496499,0.59675003159727,0.182664153764634,0,0.546138611262131,2.66852776159066,0.426730222566507,0,0,0.661044872784862,0,0,1.17447437874188,1.52909291250092,0,0,1.31692042387539,0.196709770113833,0,0.411202997999018,0.334372990781356,0,0.946895611469467,0,0.668462741311041,0.294605907474837,0.221533894583621,0,0.512365278902701,0.260118695119756,0,0.829050053357545,0.579606171470105,0.14828656316206,0.535081656179426,0,0.679856056185397,0.766440987203842,0.34362744548263,0.253019692019503,0.318565414324097,0,2.85135613334512,0.301150238155546,0.127986611154418,1.24930726552346,0.710331756132051,0,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0.895037932904712,0.361439152384566,0,0.144846518960824,2.3858578411533,0.486634870302636,1.51255707462509,1.10864698731282,0.87834785693126,3.79839318943367,6.9216104775583,1.85392221392215,1.62273696827342,0.870648686496336,1.46253756570752,0.476981248610684,0.571994910780128,0.371457501329565,0.993812036833525,0,1.38856200643038,1.13061588384802,0,1.37559020970034,1.04497483268405,1.03366703667732,0.35576626268671,1.00416183829401,1.20848795132744,2.28081631715554,0.488124115096339,0,0.81014194788176,0.625098097988558,0.22452937262617,0.337834441449967,0,0.949265659568129,0.916008719652036,0,0,4.36094052142534,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,1.97334038733728,0.622422070799533,0.538842688278752,0.326923806226917,0.908144565869588,0.576175924479999,1.17160715916898,0,0,0.597794722207204,0.822041490506354,0.323745888736263,0.702254033511242,0,0.245668634623536,0.206651562351531,0,0,1.82032272387605,0.718618141816238,0.673344455816265,1.12606667884768,0,0,0,0.150238058906597,0.794025282120147,0.358779271377724,0,0,0.600182192168805,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0.389748020644795,0.252433774244115,0.368199594569197,0.484938170456436,0.710019185033229,0,0.169560592310488,0.773043412653187,0.818238361772504,2.00763216772303,14.758818441681,13.38550660047,10.8060366868652,8.70752862129112,12.6160425437814,4.37972830890996,0,0,0,0,0,1.0647612003586,1.68584690078102,1.44606617930089,2.09558548191549,1.52515610864684,1.89816495288877,1.8876383142423,0.784885860501384,0.769494313892781,1.4763109092493,1.40241773803446,0.4115740113314,0,0,0,0,0,6.64137568132813,1.02940686179115,2.08525542276389,2.24803506515239,1.91005047582099,4.53683381276795,1.62904152655162,1.03993478527958,2.88662684050547,1.39116485970092,0.70445216541493,0.577465791044295,0.925971025153221,0.190254152234598,4.74122638775565,1.71697232418975,0,0,0.891786973732369,0,1.17587489739202,0.567100388969546,0.53735113621709,0,2.68367875415648,0.985326475791887,0.088048434013226,0.414656231081544,0.576479813667846,0.75745460055828,0.317489471460845,0.763976851116555,0,0,0.719792448923265,0.300343057843917,1.14330573052231,0.560655421726804,1.30788020649984,0.36669142910475,0.904902010304444,3.57656445851882,0,0.26593811658487,0,0.514414748524284,0,0.799266537048298,0.285955987316295,1.08524321078289,0,0.325736184293735,0.355391948742546,0,0.301439377059586,1.74306691720059,1.3996218765488,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.537182889719687,0.672510863961164,0.788123040807709,0.646882724578552,0.256686072559497,4.57370323600434,7.8083912314573,3.09315525111078,0.502548796003046,1.91381625495949,2.24702107184155,0,0.828831026872071,2.08575535922538,0.500170521059677,0.542530047399471,0.623912584592421,0.356857977594324,0.473107245101804,0.585707074963566,0.300946099727719,2.27407504055985,2.0694614258501,0,0.368738337083406,0.60818530127658,1.37060810223918,1.37257369524342,1.03384013061444,0,0.74709290462411,1.5156378572313,0,5.14063498660456,0.496215615637554,0.153461973288062,0,0,0,0.160853921143607,0,0.308419387605311,0.355123450626254,0.328508624055237,0.519254429183621,0,9.54789651773816,2.6065841139427,1.56537681191024,0.34444334449382,0.546273504020151,0.655622074797121,5.86559496779635,1.15523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| ||
|short_description=p7@RNF44 | |short_description=p7@RNF44 | ||
}} | }} |
Latest revision as of 04:28, 17 September 2015
Short description: | p7@RNF44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RNF44_5end |
Coexpression cluster: | NA |
Association with transcript: | 279bp_to_ENST00000504160_5end |
EntrezGene: | RNF44 |
HGNC: | 19180 |
UniProt: | D6RAW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.74e-27 | 253 |
endodermal cell | 1.95e-11 | 58 |
endo-epithelial cell | 5.06e-10 | 42 |
epithelial cell of alimentary canal | 3.73e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.60e-09 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.96e-36 | 235 |
disease of cellular proliferation | 6.97e-34 | 239 |
cell type cancer | 4.35e-25 | 143 |
carcinoma | 9.52e-24 | 106 |
organ system cancer | 9.21e-17 | 137 |
myeloid leukemia | 3.22e-10 | 31 |
leukemia | 1.43e-09 | 39 |
hematologic cancer | 1.67e-08 | 51 |
immune system cancer | 1.67e-08 | 51 |
germ cell and embryonal cancer | 7.38e-08 | 22 |
germ cell cancer | 7.38e-08 | 22 |