FFCP PHASE1:Hg19::chr1:38325256..38325280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4520 | |EntrezGene=4520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7428 | |HGNC=7428 | ||
|TSSclassifier=strong | |||
|UniProt=Q14872 | |UniProt=Q14872 | ||
|association_with_transcript=11bp_to_ENST00000373036,NM_005955,uc001cce.1,uc009vvj.1_5end | |association_with_transcript=11bp_to_ENST00000373036,NM_005955,uc001cce.1,uc009vvj.1_5end | ||
|cluster_id=chr1:38325256..38325280,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_MTF1_5end | |description=CAGE_peak_1_at_MTF1_5end | ||
|id=chr1:38325256..38325280,- | |id=chr1:38325256..38325280,- | ||
|ontology_enrichment_celltype=CL:0000738!2.73e-30!140;CL:0000766!3.19e-30!76;CL:0002009!9.59e-28!65;CL:0002194!9.14e-27!63;CL:0000576!9.14e-27!63;CL:0000040!9.14e-27!63;CL:0000559!9.14e-27!63;CL:0000557!2.85e-26!71;CL:0002057!3.41e-26!42;CL:0000860!1.52e-25!45;CL:0000839!1.99e-25!70;CL:0002087!4.07e-24!119;CL:0002031!1.71e-23!124;CL:0000037!3.83e-20!172;CL:0000566!3.83e-20!172;CL:0002032!1.87e-18!165;CL:0000837!1.87e-18!165;CL:0000763!9.52e-18!112;CL:0000049!9.52e-18!112;CL:0000988!2.42e-17!182 | |ontology_enrichment_celltype=CL:0000738!2.73e-30!140;CL:0000766!3.19e-30!76;CL:0002009!9.59e-28!65;CL:0002194!9.14e-27!63;CL:0000576!9.14e-27!63;CL:0000040!9.14e-27!63;CL:0000559!9.14e-27!63;CL:0000557!2.85e-26!71;CL:0002057!3.41e-26!42;CL:0000860!1.52e-25!45;CL:0000839!1.99e-25!70;CL:0002087!4.07e-24!119;CL:0002031!1.71e-23!124;CL:0000037!3.83e-20!172;CL:0000566!3.83e-20!172;CL:0002032!1.87e-18!165;CL:0000837!1.87e-18!165;CL:0000763!9.52e-18!112;CL:0000049!9.52e-18!112;CL:0000988!2.42e-17!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.75e-20;33!CL:0002057;4.75e-20;33!CL:0000576;6.42e-18;48!CL:0000473;7.33e-17;39!CL:0000234;7.33e-17;39!CL:0000766;2.46e-13;69!CL:0002087;2.17e-08;104!CL:0000738;2.62e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.34e-31,72;CL:0000738,2.62e-30,136;CL:0002009,2.23e-28,61;CL:0002194,2.13e-27,59;CL:0000576,2.13e-27,59;CL:0000040,2.13e-27,59;CL:0000559,2.13e-27,59;CL:0000557,9.61e-27,67;CL:0000860,3.41e-26,42;CL:0002057,3.41e-26,42;CL:0000839,6.97e-26,66;CL:0000473,4.06e-25,48;CL:0000234,4.06e-25,48;CL:0002087,3.84e-24,115;CL:0002031,1.73e-23,120;CL:0000037,5.45e-20,168;CL:0002032,2.65e-18,161;CL:0000837,2.65e-18,161;CL:0000763,1.05e-17,108;CL:0000049,1.05e-17,108;CL:0000988,2.91e-17,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.73e-23!102;UBERON:0003061!7.73e-23!102;UBERON:0002371!2.25e-21!80;UBERON:0002193!1.28e-20!112;UBERON:0001474!1.99e-20!86;UBERON:0004765!1.25e-16!101;UBERON:0001434!1.25e-16!101;UBERON:0002405!1.11e-13!115;UBERON:0007023!1.32e-12!115;UBERON:0002616!4.66e-07!59;UBERON:0001049!6.08e-07!57;UBERON:0005068!6.08e-07!57;UBERON:0006241!6.08e-07!57;UBERON:0007135!6.08e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.18e-23,98;UBERON:0003061,6.18e-23,98;UBERON:0002371,1.35e-21,76;UBERON:0002193,1.25e-20,108;UBERON:0001474,1.42e-20,82;UBERON:0002405,2.70e-18,93;UBERON:0004765,3.12e-17,90;UBERON:0001434,2.85e-15,100;UBERON:0007023,2.58e-12,114;UBERON:0000073,2.25e-07,53;UBERON:0002616,2.25e-07,53;UBERON:0001049,6.90e-07,56;UBERON:0005068,6.90e-07,56;UBERON:0006241,6.90e-07,56;UBERON:0007135,6.90e-07,56 | |||
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| ||
|short_description=p1@MTF1 | |short_description=p1@MTF1 | ||
}} | }} |
Latest revision as of 22:39, 17 September 2015
Short description: | p1@MTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTF1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 11bp_to_ENST00000373036, NM_005955, uc001cce.1, uc009vvj.1_5end |
EntrezGene: | MTF1 |
HGNC: | 7428 |
UniProt: | Q14872 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.34e-31 | 72 |
leukocyte | 2.62e-30 | 136 |
macrophage dendritic cell progenitor | 2.23e-28 | 61 |
monopoietic cell | 2.13e-27 | 59 |
monocyte | 2.13e-27 | 59 |
monoblast | 2.13e-27 | 59 |
promonocyte | 2.13e-27 | 59 |
granulocyte monocyte progenitor cell | 9.61e-27 | 67 |
classical monocyte | 3.41e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-26 | 42 |
myeloid lineage restricted progenitor cell | 6.97e-26 | 66 |
defensive cell | 4.06e-25 | 48 |
phagocyte | 4.06e-25 | 48 |
nongranular leukocyte | 3.84e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 1.73e-23 | 120 |
hematopoietic stem cell | 5.45e-20 | 168 |
hematopoietic oligopotent progenitor cell | 2.65e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.65e-18 | 161 |
myeloid cell | 1.05e-17 | 108 |
common myeloid progenitor | 1.05e-17 | 108 |
hematopoietic cell | 2.91e-17 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.18e-23 | 98 |
blood island | 6.18e-23 | 98 |
bone marrow | 1.35e-21 | 76 |
hemolymphoid system | 1.25e-20 | 108 |
bone element | 1.42e-20 | 82 |
immune system | 2.70e-18 | 93 |
skeletal element | 3.12e-17 | 90 |
skeletal system | 2.85e-15 | 100 |
adult organism | 2.58e-12 | 114 |
regional part of nervous system | 2.25e-07 | 53 |
regional part of brain | 2.25e-07 | 53 |
neural tube | 6.90e-07 | 56 |
neural rod | 6.90e-07 | 56 |
future spinal cord | 6.90e-07 | 56 |
neural keel | 6.90e-07 | 56 |