FFCP PHASE1:Hg19::chr1:89150245..89150256,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5586 | |EntrezGene=5586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9406 | |HGNC=9406 | ||
|TSSclassifier=strong | |||
|UniProt=E7ESL7 | |UniProt=E7ESL7 | ||
|association_with_transcript=0bp_to_ENST00000370513_5end | |association_with_transcript=0bp_to_ENST00000370513_5end | ||
|cluster_id=chr1:89150245..89150256,+ | |||
|description=CAGE_peak_6_at_PKN2_5end | |description=CAGE_peak_6_at_PKN2_5end | ||
|id=chr1:89150245..89150256,+ | |id=chr1:89150245..89150256,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.74e-10!254 | |ontology_enrichment_celltype=CL:0000066!3.74e-10!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.12e-07;1 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.55e-13;14!DOID:4929;3.10e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.97e-13,14;DOID:4929,3.84e-11,2;DOID:305,1.25e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.55e-08!155;UBERON:0001555!1.55e-08!155;UBERON:0007026!1.55e-08!155;UBERON:0004119!4.12e-08!169;UBERON:0000925!4.12e-08!169;UBERON:0006595!4.12e-08!169;UBERON:0004921!2.76e-07!129;UBERON:0004185!2.76e-07!129 | |ontology_enrichment_uberon=UBERON:0001007!1.55e-08!155;UBERON:0001555!1.55e-08!155;UBERON:0007026!1.55e-08!155;UBERON:0004119!4.12e-08!169;UBERON:0000925!4.12e-08!169;UBERON:0006595!4.12e-08!169;UBERON:0004921!2.76e-07!129;UBERON:0004185!2.76e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.03e-17;4!UBERON:0000160;7.80e-10;17!UBERON:0002114;9.04e-08;2!UBERON:0005409;1.44e-07;22!UBERON:0000941;7.12e-07;1!UBERON:0001785;7.12e-07;1!UBERON:0002464;7.12e-07;1!UBERON:0004904;7.12e-07;1!UBERON:0001021;7.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.64e-17,4;UBERON:0000160,4.62e-10,17;UBERON:0002114,5.04e-08,2;UBERON:0000941,6.23e-07,1;UBERON:0001785,6.23e-07,1;UBERON:0002464,6.23e-07,1;UBERON:0004904,6.23e-07,1;UBERON:0001021,6.23e-07,1;UBERON:0003902,6.23e-07,1;UBERON:0005425,6.23e-07,1;UBERON:0005409,8.92e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.251085279189606,0.152826811495903,0,0,0,0.383829398097213,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0.581592955118259,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.598390972864896,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0,0.32145117339416,0,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0.351339142772504,0.261958150995425,0,0,0,0,0,0.238490624305342,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,1.00416183829401,0,0,0,0,0,0.17859945656816,0.44905874525234,0.337834441449967,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0,0.926864265692532,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.653847612453835,0,0.576175924479999,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.368502951935304,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0.831192346452549,0,0,0,0,0.358779271377724,0,0,0,0.309157587715317,0.515281080091258,0.18611685633159,1.0126579934476,0.194874010322397,0.504867548488229,0.0920498986422993,0.161646056818812,0.710019185033229,0.302256294682921,0,0.57978255948989,0.272746120590835,0.573609190778008,0.121973706129595,0.397589304964456,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.709840800239063,0.842923450390509,0.964044119533928,0.55146986366197,0,0.474541238222193,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0,0.658501712451753,0,0.100528972411631,0.185176890317059,0,0,0,0.34779121492523,0,0,0,0.570762456703795,0,0,0,0,0,0.93733833986777,0.839910640994298,0.425325291727159,0.358234090811393,0,0,0,0.264145302039678,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.167516265334349,0,0,5.9832291840805,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0.206768026122887,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0.460385919864187,0,0.128139149255701,0,0,1.48418066444991,0.308419387605311,0,0.0821271560138091,0,0.232420756919918,0.604297247958111,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0.721287081534056,0.640986253728404,0.495056999523528,0,0.650060246036521,1.6068392984416,0.290012154876366,0,0,0,0.644521469209642,0.145016693914229,0.170453254832202,0.0890320356467374,0.330569830721956,0.384380134730212,0.765676274967505,0.2023155617111,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,0,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0.534120355637366,0.962479855263359,0.245040215981032,0,0.144269212976445,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0.50787533340481,0.1605880751037,0,0,0.687010689511529,0,0.447352215784832,0.166849141711909,0,0,0,0,0.33307196799782,0,0.748562161632879,0.439524537815682,0.242721043499027,0,0,0.47748896947538,1.78178808499583,0.921482106297696,0,0.140669416410513,0.111308705022906,0.16480387422676,2.11125408127993,0,0.552567831062295,0.251932747854276,1.22722419002586,0,0,0.808815160325942,1.25314822272926,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.682760689712998,0,1.89110145414349,0,0,0.520874984799877,0,0,4.5774520895125,0.663475559587348,0,0.219385397153973,0.762569244632931,0.697118721393016,0.0769502585037971,0.113942055847001,0.46112780877612,0.0897576444097721,0.760531603454056,0,0.641183153813036,0.533034776018635,0,0,0.498635045700469,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0.63299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| ||
|short_description=p6@PKN2 | |short_description=p6@PKN2 | ||
}} | }} |
Latest revision as of 15:43, 19 September 2015
Short description: | p6@PKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PKN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370513_5end |
EntrezGene: | PKN2 |
HGNC: | 9406 |
UniProt: | E7ESL7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.64e-17 | 4 |
intestine | 4.62e-10 | 17 |
duodenum | 5.04e-08 | 2 |
cranial nerve II | 6.23e-07 | 1 |
cranial nerve | 6.23e-07 | 1 |
nerve trunk | 6.23e-07 | 1 |
nerve connecting eye with brain | 6.23e-07 | 1 |
nerve | 6.23e-07 | 1 |
retinal neural layer | 6.23e-07 | 1 |
presumptive neural retina | 6.23e-07 | 1 |
gastrointestinal system | 8.92e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.97e-13 | 14 |
tubular adenocarcinoma | 3.84e-11 | 2 |
carcinoma | 1.25e-07 | 106 |