FFCP PHASE1:Hg19::chr6:169588553..169588570,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:169588553..169588570,- | |||
|coexpression_cluster_id=C559 | |||
|description=CAGE_peak_at_chr6:169588553..169588570,- | |description=CAGE_peak_at_chr6:169588553..169588570,- | ||
|id=chr6:169588553..169588570,- | |id=chr6:169588553..169588570,- | ||
|ontology_enrichment_celltype=CL:0000188!7.83e-44!9;CL:0000594!3.12e-19!3;CL:0000680!3.61e-11!57;CL:0000056!3.61e-11!57;CL:0000355!3.61e-11!57;CL:0000183!7.97e-11!59;CL:0000187!7.57e-10!54;CL:0002590!3.98e-09!3;CL:0000393!1.10e-08!60;CL:0000211!1.10e-08!60;CL:0000864!1.18e-07!1;CL:0000091!1.18e-07!1 | |ontology_enrichment_celltype=CL:0000188!7.83e-44!9;CL:0000594!3.12e-19!3;CL:0000680!3.61e-11!57;CL:0000056!3.61e-11!57;CL:0000355!3.61e-11!57;CL:0000183!7.97e-11!59;CL:0000187!7.57e-10!54;CL:0002590!3.98e-09!3;CL:0000393!1.10e-08!60;CL:0000211!1.10e-08!60;CL:0000864!1.18e-07!1;CL:0000091!1.18e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000188;2.69e-44;9!CL:0002262;1.37e-13;2!CL:1000398;1.37e-13;2!CL:0002575;1.37e-13;2!CL:0000669;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.84e-44,9;CL:0002575,1.21e-13,2;CL:0002262,1.37e-13,2;CL:1000398,1.37e-13,2;CL:0000187,1.18e-07,55;CL:0000669,1.80e-07,4;CL:0000680,2.81e-07,58;CL:0000056,2.81e-07,58;CL:0000355,2.81e-07,58;CL:0000393,6.16e-07,61;CL:0000211,6.16e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3571!1.18e-07!1;DOID:5662!1.72e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001280!1.26e-14!4;UBERON:0004647!1.26e-14!4;UBERON:0001134!2.65e-10!61;UBERON:0002036!2.65e-10!61;UBERON:0003082!2.65e-10!61;UBERON:0000486!3.79e-10!82;UBERON:0002385!6.54e-10!63;UBERON:0001015!6.54e-10!63;UBERON:0000383!6.54e-10!63;UBERON:0003497!1.98e-09!3;UBERON:0003909!1.98e-09!3;UBERON:0003835!1.98e-09!3;UBERON:0001281!1.98e-09!3;UBERON:0004290!1.02e-08!70;UBERON:0001282!2.50e-07!1;UBERON:0009842!2.50e-07!1;UBERON:0003704!2.50e-07!1;UBERON:0001171!2.50e-07!1;UBERON:0001172!2.50e-07!1;UBERON:0000490!4.60e-07!138;UBERON:0000914!4.84e-07!83;UBERON:0002329!4.84e-07!83;UBERON:0003077!4.84e-07!83;UBERON:0003059!4.84e-07!83;UBERON:0007282!4.84e-07!83;UBERON:0009618!4.84e-07!83;UBERON:0007285!4.84e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.26e-25;16!UBERON:0002036;3.26e-25;16!UBERON:0001281;1.37e-13;2!UBERON:0003497;1.37e-13;2!UBERON:0003909;1.37e-13;2!UBERON:0003835;1.37e-13;2!UBERON:0002385;1.38e-12;31!UBERON:0001015;1.38e-12;31!UBERON:0000383;1.38e-12;31!UBERON:0001280;1.67e-09;3!UBERON:0004647;1.67e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.37e-13,2;UBERON:0003497,1.37e-13,2;UBERON:0003909,1.37e-13,2;UBERON:0003835,1.37e-13,2;UBERON:0001280,1.67e-09,3;UBERON:0004647,1.67e-09,3;UBERON:0005171,1.67e-09,3;UBERON:0001134,7.88e-07,62;UBERON:0002036,7.88e-07,62;UBERON:0003082,7.88e-07,62 | |||
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|short_description=p@chr6:169588553..169588570,- | |short_description=p@chr6:169588553..169588570,- | ||
}} | }} |
Latest revision as of 22:15, 30 July 2015
Short description: | p@chr6:169588553..169588570, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:169588553..169588570, - |
Coexpression cluster: | C559_Skeletal_Pericytes_mesenchymal_Myoblast_rhabdomyosarcoma_skeletal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.84e-44 | 9 |
central nervous system pericyte | 1.21e-13 | 2 |
endothelial cell of sinusoid | 1.37e-13 | 2 |
endothelial cell of hepatic sinusoid | 1.37e-13 | 2 |
muscle cell | 1.18e-07 | 55 |
pericyte cell | 1.80e-07 | 4 |
muscle precursor cell | 2.81e-07 | 58 |
myoblast | 2.81e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.81e-07 | 58 |
electrically responsive cell | 6.16e-07 | 61 |
electrically active cell | 6.16e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.37e-13 | 2 |
abdomen blood vessel | 1.37e-13 | 2 |
sinusoid | 1.37e-13 | 2 |
abdominal segment blood vessel | 1.37e-13 | 2 |
liver parenchyma | 1.67e-09 | 3 |
liver lobule | 1.67e-09 | 3 |
hepatic duct | 1.67e-09 | 3 |
skeletal muscle tissue | 7.88e-07 | 62 |
striated muscle tissue | 7.88e-07 | 62 |
myotome | 7.88e-07 | 62 |