FFCP PHASE1:Hg19::chr13:113841834..113841842,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:113841834..113841842,-
|short_description=p18@PCID2
|description=CAGE_peak_18_at_PCID2_5end
|association_with_transcript=-121bp_to_ENST00000473462_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55795 | |EntrezGene=55795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25653 | |HGNC=25653 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-121bp_to_ENST00000473462_5end | |||
|cluster_id=chr13:113841834..113841842,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_18_at_PCID2_5end | |||
|id=chr13:113841834..113841842,- | |||
|ontology_enrichment_celltype=CL:0002057!4.11e-50!42;CL:0000860!4.51e-50!45;CL:0002194!3.87e-33!63;CL:0000576!3.87e-33!63;CL:0000040!3.87e-33!63;CL:0000559!3.87e-33!63;CL:0002009!6.33e-32!65;CL:0000839!3.43e-29!70;CL:0000766!1.03e-28!76;CL:0000557!1.09e-28!71;CL:0002087!2.54e-20!119;CL:0002031!9.10e-18!124;CL:0000738!1.51e-17!140;CL:0000763!2.47e-17!112;CL:0000049!2.47e-17!112;CL:0000037!6.97e-13!172;CL:0000566!6.97e-13!172;CL:0002032!1.11e-12!165;CL:0000837!1.11e-12!165;CL:0000988!9.08e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.83e-37;33!CL:0002057;4.83e-37;33!CL:0000473;6.53e-30;39!CL:0000234;6.53e-30;39!CL:0000576;1.51e-24;48!CL:0000766;3.73e-17;69!CL:0002087;2.53e-10;104!CL:0000763;3.75e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.11e-42,42;CL:0002057,5.11e-42,42;CL:0000473,9.02e-37,48;CL:0000234,9.02e-37,48;CL:0002194,2.04e-29,59;CL:0000576,2.04e-29,59;CL:0000040,2.04e-29,59;CL:0000559,2.04e-29,59;CL:0002009,1.81e-28,61;CL:0000839,2.43e-26,66;CL:0000557,5.95e-26,67;CL:0000766,3.60e-24,72;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-31;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.67e-25!80;UBERON:0002390!6.85e-23!102;UBERON:0003061!6.85e-23!102;UBERON:0001474!1.45e-22!86;UBERON:0002193!3.30e-20!112;UBERON:0004765!2.95e-18!101;UBERON:0001434!2.95e-18!101;UBERON:0002405!5.31e-18!115;UBERON:0002204!1.42e-08!167;UBERON:0003081!7.14e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-23,76;UBERON:0001474,3.01e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,9.53e-19,93;UBERON:0002390,8.57e-18,98;UBERON:0003061,8.57e-18,98;UBERON:0001434,1.94e-17,100;UBERON:0002193,3.81e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0003081,1.68e-08,203 | |||
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| ||
|short_description=p18@PCID2 | |||
}} | }} |
Latest revision as of 15:34, 16 September 2015
Short description: | p18@PCID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PCID2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -121bp_to_ENST00000473462_5end |
EntrezGene: | PCID2 |
HGNC: | 25653 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.11e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.11e-42 | 42 |
defensive cell | 9.02e-37 | 48 |
phagocyte | 9.02e-37 | 48 |
monopoietic cell | 2.04e-29 | 59 |
monocyte | 2.04e-29 | 59 |
monoblast | 2.04e-29 | 59 |
promonocyte | 2.04e-29 | 59 |
macrophage dendritic cell progenitor | 1.81e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.43e-26 | 66 |
granulocyte monocyte progenitor cell | 5.95e-26 | 67 |
myeloid leukocyte | 3.60e-24 | 72 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
nongranular leukocyte | 3.68e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.54e-23 | 76 |
bone element | 3.01e-21 | 82 |
skeletal element | 2.27e-19 | 90 |
immune system | 9.53e-19 | 93 |
hematopoietic system | 8.57e-18 | 98 |
blood island | 8.57e-18 | 98 |
skeletal system | 1.94e-17 | 100 |
hemolymphoid system | 3.81e-16 | 108 |
musculoskeletal system | 2.16e-10 | 167 |
lateral plate mesoderm | 1.68e-08 | 203 |