FFCP PHASE1:Hg19::chr20:35176518..35176542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35176518..35176542,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35176518..35176542,+ | |description=CAGE_peak_at_chr20:35176518..35176542,+ | ||
|id=chr20:35176518..35176542,+ | |id=chr20:35176518..35176542,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.61e-21!180;CL:0000057!6.24e-14!75;CL:0000680!9.71e-12!57;CL:0000056!9.71e-12!57;CL:0000355!9.71e-12!57;CL:0000183!1.10e-11!59;CL:0000192!2.90e-11!42;CL:0000514!2.90e-11!42;CL:0000187!3.93e-11!54;CL:0000393!1.23e-09!60;CL:0000211!1.23e-09!60;CL:0000359!1.53e-08!32;CL:0000222!1.48e-07!119;CL:0000136!4.58e-07!15 | |ontology_enrichment_celltype=CL:0000055!1.61e-21!180;CL:0000057!6.24e-14!75;CL:0000680!9.71e-12!57;CL:0000056!9.71e-12!57;CL:0000355!9.71e-12!57;CL:0000183!1.10e-11!59;CL:0000192!2.90e-11!42;CL:0000514!2.90e-11!42;CL:0000187!3.93e-11!54;CL:0000393!1.23e-09!60;CL:0000211!1.23e-09!60;CL:0000359!1.53e-08!32;CL:0000222!1.48e-07!119;CL:0000136!4.58e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000134;9.70e-09;55!CL:0000192;1.02e-08;43!CL:0000359;3.56e-08;32!CL:0000048;1.07e-07;58!CL:0000723;4.51e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.45e-12,43;CL:0000514,3.45e-12,43;CL:0000057,3.84e-11,76;CL:0000680,1.43e-10,58;CL:0000056,1.43e-10,58;CL:0000355,1.43e-10,58;CL:0000187,7.49e-10,55;CL:0000359,1.35e-08,32;CL:0000393,2.74e-08,61;CL:0000211,2.74e-08,61;CL:0000136,5.31e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.02e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!4.97e-16!143;UBERON:0000914!1.56e-15!83;UBERON:0002329!1.56e-15!83;UBERON:0003077!1.56e-15!83;UBERON:0003059!1.56e-15!83;UBERON:0007282!1.56e-15!83;UBERON:0009618!1.56e-15!83;UBERON:0007285!1.56e-15!83;UBERON:0004290!5.32e-14!70;UBERON:0002385!2.56e-13!63;UBERON:0001015!2.56e-13!63;UBERON:0000383!2.56e-13!63;UBERON:0000486!1.16e-12!82;UBERON:0001134!2.35e-12!61;UBERON:0002036!2.35e-12!61;UBERON:0003082!2.35e-12!61;UBERON:0002100!8.62e-12!216;UBERON:0003104!7.06e-11!238;UBERON:0009142!7.06e-11!238;UBERON:0000481!1.67e-10!347;UBERON:0000468!3.96e-10!659;UBERON:0004872!6.25e-10!84;UBERON:0001009!1.83e-09!113;UBERON:0004535!1.30e-08!110;UBERON:0000926!2.30e-08!448;UBERON:0004120!2.30e-08!448;UBERON:0006603!2.30e-08!448;UBERON:0000475!7.16e-08!365;UBERON:0007100!9.25e-08!27;UBERON:0003914!9.75e-08!118;UBERON:0002049!2.60e-07!79;UBERON:0007798!2.60e-07!79;UBERON:0000480!3.27e-07!626;UBERON:0000467!3.32e-07!625;UBERON:0000490!5.66e-07!138;UBERON:0001981!9.42e-07!60;UBERON:0007500!9.42e-07!60;UBERON:0004537!9.42e-07!60;UBERON:0006965!9.42e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.29e-08;25!UBERON:0001013;4.61e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.32e-14,160;UBERON:0009142,2.32e-14,160;UBERON:0005256,5.22e-14,122;UBERON:0007503,1.58e-12,78;UBERON:0007524,3.81e-12,73;UBERON:0002329,4.85e-12,71;UBERON:0003059,4.85e-12,71;UBERON:0007282,4.85e-12,71;UBERON:0004290,4.85e-12,71;UBERON:0009618,4.85e-12,71;UBERON:0002385,5.51e-12,64;UBERON:0001015,5.51e-12,64;UBERON:0000383,5.51e-12,64;UBERON:0003077,1.20e-11,72;UBERON:0007285,1.20e-11,72;UBERON:0001134,6.35e-11,62;UBERON:0002036,6.35e-11,62;UBERON:0003082,6.35e-11,62;UBERON:0000926,7.04e-11,315;UBERON:0004120,7.04e-11,315;UBERON:0006603,7.04e-11,315;UBERON:0000486,9.44e-10,83;UBERON:0002100,4.57e-09,199;UBERON:0004872,2.77e-07,83;UBERON:0001013,4.46e-07,14;UBERON:0001009,5.34e-07,112;UBERON:0007100,7.36e-07,27 | |||
|phase1_expression=6.54042165374004,20.9818513413163,7.75249222527841,27.0197905553452,32.628159893192,17.4467704820074,50.6599756336621,2.52687949370732,2.08948502559871,2.7030733015166,6.97801167972428,0,1.05506791291381,0.37129905888014,1.32558950291166,14.1188280754873,12.0538905604795,7.30310090387373,12.1983199697627,0.246242116153576,0.816002764977012,1.25381888591235,0.572471974262113,0.684372125364421,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,1.15076305659177,1.44575660953827,2.50668955317945,2.60723734129483,0,2.43317435151318,0.945348171640679,7.53879951372717,1.66886092816939,1.5062593682237,0,0,0,0.348259474598534,1.19662164466979,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0.66944122552934,1.20848795132744,0,1.46437234528902,0,1.62028389576352,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0.436094052142534,6.95760732373446,4.43206790826029,0.529636723252875,1.43418310374407,3.90135220418193,11.7742296029885,4.2699598291882,19.98007142179,0.933633106199299,0.942974704487816,1.63461903113459,1.36221684880438,0.576175924479999,0,1.87296046098192,1.71141546463335,1.64393548606981,0.117434498643765,0.647491777472526,0.140450806702248,0.408308342509787,0.61417158655884,0.826606249406124,9.50402285825643,21.5122228472344,1.82032272387605,14.3723628363248,0.168336113954066,1.50142223846357,0.554128230968366,7.02364193409341,18.6957555437402,9.4649977111156,0.907457465280168,3.94657198515496,2.98980344345994,4.66250182551036,2.40072876867522,3.81294358182224,4.12224864073007,3.7223371266318,0.506328996723799,4.28722822709274,3.5340728394176,3.22174645248048,2.10139873864455,6.74518225781567,8.86618464403234,2.37384829234683,0.386521706326594,0.272746120590835,0,2.07355300420312,1.32529768321485,1.04574548582567,0.829288440122964,1.26160425437814,1.09493207722749,14.0804579096834,23.1566737749439,8.28809528114883,3.71494342425583,8.66255378003503,1.18306800039844,1.34867752062481,0.964044119533928,1.43382164552112,0.871517776369625,0.474541238222193,0.539325232640658,0.588664395376038,1.53898862778556,1.4763109092493,5.60967095213783,2.057870056657,8.82052268313252,0,0,1.18157981336281,0,0.491953754172454,0.514703430895577,0,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.231860809950154,3.17003474436719,0.144366447761074,0,0.190254152234598,0,0,0,0.468008530278475,0.297262324577456,0.93733833986777,0.503946384596579,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,1.17217447210047,3.4214489204541,0.308482478109971,0,0,0.448524337381443,2.61576041299968,0.36669142910475,2.19761916788222,21.4593867511129,2.535908257668,9.0418959638856,15.6011155367049,1.02882949704857,1.41849132023278,1.8649552531127,2.14466990487221,1.62786481617433,3.29296134712308,0.65147236858747,1.06617584622764,0,1.80863626235752,4.35766729300147,8.19778527692868,0,0,0,4.79249710983165,12.6348129417525,0,3.18518874668674,1.64381058040307,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.2269149171914,2.00068208423871,1.35632511849868,12.0623099687868,23.9094844988197,7.41201350659493,5.38850508966481,2.10662269809403,15.9185252839189,7.24311499047534,1.99267679560631,4.24049087645917,3.64911180765948,1.56640925970192,1.37257369524342,0,0,0.106727557803444,0,1.66435439510497,0.30239029332968,2.72918588600655,1.53461973288062,13.7523446272206,2.30650468660262,5.11707249066703,9.65123526861645,14.8418066444991,4.62629081407967,3.72879623157567,0.9033987161519,5.71179872101983,4.88083589531829,0.966875596732978,2.40607764363942,0,2.18147451512753,5.46273504020151,16.1283030400092,0,0,0.784349769176855,1.46139224653261,0.105551628892876,0,0.340187410553031,1.0795795805107,1.54227252690289,1.08378575017541,5.01689773854853,0,0,0.895499018888713,0,0,0.256450125116389,1.96808787419823,0.650756789328606,0.9273691048295,0.183138929636687,0.165018999841176,1.14853107599234,0,11.2478750890912,0.773365746336976,1.54048617114644,0.307007349452259,1.10269257987624,0.644521469209642,2.0302337147992,0.681813019328807,0.623224249527161,0.165284915360978,0.384380134730212,0,0.50578890427775,16.7344397747023,2.83331112147576,0.6970372701606,0.924100740528266,1.59691809095107,0.869932992075073,2.7798632865588,2.43312307461385,1.116475108079,3.48017367190598,6.67205678733387,1.535386747868,2.1396949401696,0,7.8494864019923,1.61885211824983,5.4907405947211,2.12062324222236,2.42618977887979,4.75530963519025,1.68503382495592,2.43816869544795,3.1682753652067,13.7345190783782,5.05049672209547,6.36324443791707,0,0,3.98063385144732,11.3997230165978,4.05142873986681,3.27947376023316,5.47858017799301,9.2947049429925,5.07052084558035,0.860468113224309,1.8667317792493,5.35006577221875,1.41904425628239,3.58882980006029,3.6222438225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| ||
|short_description=p@chr20:35176518..35176542,+ | |short_description=p@chr20:35176518..35176542,+ | ||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35176518..35176542, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35176518..35176542, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.45e-12 | 43 |
smooth muscle myoblast | 3.45e-12 | 43 |
fibroblast | 3.84e-11 | 76 |
muscle precursor cell | 1.43e-10 | 58 |
myoblast | 1.43e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-10 | 58 |
muscle cell | 7.49e-10 | 55 |
vascular associated smooth muscle cell | 1.35e-08 | 32 |
electrically responsive cell | 2.74e-08 | 61 |
electrically active cell | 2.74e-08 | 61 |
fat cell | 5.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.32e-14 | 160 |
entire embryonic mesenchyme | 2.32e-14 | 160 |
trunk mesenchyme | 5.22e-14 | 122 |
epithelial vesicle | 1.58e-12 | 78 |
dense mesenchyme tissue | 3.81e-12 | 73 |
somite | 4.85e-12 | 71 |
presomitic mesoderm | 4.85e-12 | 71 |
presumptive segmental plate | 4.85e-12 | 71 |
dermomyotome | 4.85e-12 | 71 |
trunk paraxial mesoderm | 4.85e-12 | 71 |
muscle tissue | 5.51e-12 | 64 |
musculature | 5.51e-12 | 64 |
musculature of body | 5.51e-12 | 64 |
paraxial mesoderm | 1.20e-11 | 72 |
presumptive paraxial mesoderm | 1.20e-11 | 72 |
skeletal muscle tissue | 6.35e-11 | 62 |
striated muscle tissue | 6.35e-11 | 62 |
myotome | 6.35e-11 | 62 |
mesoderm | 7.04e-11 | 315 |
mesoderm-derived structure | 7.04e-11 | 315 |
presumptive mesoderm | 7.04e-11 | 315 |
multilaminar epithelium | 9.44e-10 | 83 |
trunk | 4.57e-09 | 199 |
splanchnic layer of lateral plate mesoderm | 2.77e-07 | 83 |
adipose tissue | 4.46e-07 | 14 |
circulatory system | 5.34e-07 | 112 |
primary circulatory organ | 7.36e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.19e-07 | 14 |