FFCP PHASE1:Hg19::chr6:25004760..25004769,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:25004760..25004769,- | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_at_chr6:25004760..25004769,- | |description=CAGE_peak_at_chr6:25004760..25004769,- | ||
|id=chr6:25004760..25004769,- | |id=chr6:25004760..25004769,- | ||
|ontology_enrichment_celltype=CL:0002623!7.14e-28!3;CL:0000622!5.59e-17!5;CL:0000154!3.03e-14!6;CL:0000594!1.78e-12!3;CL:0000150!1.14e-09!9 | |ontology_enrichment_celltype=CL:0002623!7.14e-28!3;CL:0000622!5.59e-17!5;CL:0000154!3.03e-14!6;CL:0000594!1.78e-12!3;CL:0000150!1.14e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.27e-147;3!CL:0000622;6.64e-89;5!CL:0000154;2.58e-74;6!CL:0000150;5.60e-50;9!CL:0002251;3.95e-23;20!CL:0000151;3.77e-14;36!CL:0002569;1.57e-09;6!CL:0002076;6.22e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.27e-147,3;CL:0000622,6.64e-89,5;CL:0000154,2.58e-74,6;CL:0000150,5.60e-50,9;CL:0002251,3.95e-23,20;CL:0000151,2.66e-13,36;CL:0002076,1.56e-11,42;CL:0002569,1.57e-09,6;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.76e-14!10;UBERON:0001044!3.03e-14!6;UBERON:0003293!3.03e-14!6;UBERON:0003294!3.03e-14!6;UBERON:0010047!3.03e-14!6;UBERON:0000167!3.03e-14!6;UBERON:0006834!4.44e-10!1;UBERON:0001301!5.30e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.58e-74;6!UBERON:0003293;2.58e-74;6!UBERON:0003294;2.58e-74;6!UBERON:0010047;2.58e-74;6!UBERON:0003408;2.58e-74;6!UBERON:0000167;2.58e-74;6!UBERON:0001041;1.46e-32;14!UBERON:0000161;2.73e-24;19!UBERON:0000166;2.73e-24;19!UBERON:0000165;8.05e-17;28!UBERON:0002365;9.12e-16;31!UBERON:0002330;9.12e-16;31!UBERON:0004921;1.58e-12;33!UBERON:0003422;1.57e-09;6!UBERON:0003104;2.35e-08;7!UBERON:0009142;2.35e-08;7!UBERON:0007811;2.39e-07;52!UBERON:0000033;2.40e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.58e-74,6;UBERON:0003293,2.58e-74,6;UBERON:0003294,2.58e-74,6;UBERON:0010047,2.58e-74,6;UBERON:0000167,2.58e-74,6;UBERON:0003408,4.18e-45,10;UBERON:0000166,3.99e-21,22;UBERON:0000165,2.82e-16,29;UBERON:0000930,2.82e-16,29;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0000161,2.66e-13,36;UBERON:0001444,5.14e-10,49;UBERON:0003422,1.57e-09,6;UBERON:0000033,7.15e-09,56;UBERON:0002530,1.83e-08,59;UBERON:0002553,3.25e-08,61;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62;UBERON:0001004,6.51e-07,74 | |||
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|short_description=p@chr6:25004760..25004769,- | |short_description=p@chr6:25004760..25004769,- | ||
}} | }} |
Latest revision as of 22:50, 30 July 2015
Short description: | p@chr6:25004760..25004769, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:25004760..25004769, - |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.27e-147 | 3 |
acinar cell | 6.64e-89 | 5 |
protein secreting cell | 2.58e-74 | 6 |
glandular epithelial cell | 5.60e-50 | 9 |
epithelial cell of alimentary canal | 3.95e-23 | 20 |
secretory cell | 2.66e-13 | 36 |
endo-epithelial cell | 1.56e-11 | 42 |
mesenchymal stem cell of umbilical cord | 1.57e-09 | 6 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.58e-74 | 6 |
gland of oral region | 2.58e-74 | 6 |
gland of foregut | 2.58e-74 | 6 |
oral gland | 2.58e-74 | 6 |
oral cavity | 2.58e-74 | 6 |
gland of gut | 4.18e-45 | 10 |
oral opening | 3.99e-21 | 22 |
mouth | 2.82e-16 | 29 |
stomodeum | 2.82e-16 | 29 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
orifice | 2.66e-13 | 36 |
subdivision of head | 5.14e-10 | 49 |
mesenchyme of umbilical cord | 1.57e-09 | 6 |
head | 7.15e-09 | 56 |
gland | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |
anterior region of body | 4.28e-08 | 62 |
craniocervical region | 4.28e-08 | 62 |
respiratory system | 6.51e-07 | 74 |