FFCP PHASE1:Hg19::chr20:57483131..57483142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81027 | |EntrezGene=81027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16257 | |HGNC=16257 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-232bp_to_JF432703_5end | |association_with_transcript=-232bp_to_JF432703_5end | ||
|cluster_id=chr20:57483131..57483142,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_3_at_TUBB1_5end | |description=CAGE_peak_3_at_TUBB1_5end | ||
|id=chr20:57483131..57483142,+ | |id=chr20:57483131..57483142,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.20e-27!140;CL:0002057!2.17e-26!42;CL:0002031!3.81e-26!124;CL:0000988!6.84e-25!182;CL:0000037!8.65e-25!172;CL:0000566!8.65e-25!172;CL:0002087!1.48e-24!119;CL:0000860!4.08e-24!45;CL:0002032!4.34e-24!165;CL:0000837!4.34e-24!165;CL:0000766!4.16e-21!76;CL:0000839!1.96e-18!70;CL:0000557!4.65e-18!71;CL:0002194!2.80e-16!63;CL:0000576!2.80e-16!63;CL:0000040!2.80e-16!63;CL:0000559!2.80e-16!63;CL:0002009!1.48e-15!65;CL:0000763!2.57e-15!112;CL:0000049!2.57e-15!112;CL:0002393!5.01e-12!9;CL:0002397!5.01e-12!9;CL:0002320!1.43e-10!365;CL:0000945!4.52e-10!24;CL:0000826!4.52e-10!24;CL:0000134!6.11e-10!358;CL:0000838!8.32e-09!52;CL:0000219!1.15e-08!390;CL:0000542!1.48e-08!53;CL:0000051!1.48e-08!53;CL:0000767!3.16e-08!3;CL:0000623!3.47e-08!3;CL:0000825!3.47e-08!3 | |ontology_enrichment_celltype=CL:0000738!4.20e-27!140;CL:0002057!2.17e-26!42;CL:0002031!3.81e-26!124;CL:0000988!6.84e-25!182;CL:0000037!8.65e-25!172;CL:0000566!8.65e-25!172;CL:0002087!1.48e-24!119;CL:0000860!4.08e-24!45;CL:0002032!4.34e-24!165;CL:0000837!4.34e-24!165;CL:0000766!4.16e-21!76;CL:0000839!1.96e-18!70;CL:0000557!4.65e-18!71;CL:0002194!2.80e-16!63;CL:0000576!2.80e-16!63;CL:0000040!2.80e-16!63;CL:0000559!2.80e-16!63;CL:0002009!1.48e-15!65;CL:0000763!2.57e-15!112;CL:0000049!2.57e-15!112;CL:0002393!5.01e-12!9;CL:0002397!5.01e-12!9;CL:0002320!1.43e-10!365;CL:0000945!4.52e-10!24;CL:0000826!4.52e-10!24;CL:0000134!6.11e-10!358;CL:0000838!8.32e-09!52;CL:0000219!1.15e-08!390;CL:0000542!1.48e-08!53;CL:0000051!1.48e-08!53;CL:0000767!3.16e-08!3;CL:0000623!3.47e-08!3;CL:0000825!3.47e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000767;9.95e-41;3!CL:0000623;3.35e-40;3!CL:0000094;9.94e-16;8!CL:0000081;1.32e-11;11!CL:0000097;2.06e-11;5!CL:0000236;5.01e-10;13!CL:0002393;1.15e-09;6!CL:0002397;1.15e-09;6!CL:0000163;9.93e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.14e-40,3;CL:0000623,1.96e-40,3;CL:0000825,1.96e-40,3;CL:0000738,1.72e-17,136;CL:0000094,1.05e-15,8;CL:0002032,1.47e-14,161;CL:0000837,1.47e-14,161;CL:0000037,6.84e-14,168;CL:0000988,4.13e-13,177;CL:0002031,5.49e-12,120;CL:0000081,1.37e-11,11;CL:0000097,1.95e-11,5;CL:0002028,1.95e-11,5;CL:0000766,8.81e-11,72;CL:0000236,2.39e-09,14;CL:0000838,5.04e-09,52;CL:0000542,7.57e-09,53;CL:0000051,7.57e-09,53;CL:0002087,2.55e-08,115;CL:0000763,5.90e-07,108;CL:0000049,5.90e-07,108;CL:0000163,9.64e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.56e-18!86;UBERON:0002371!1.14e-17!80;UBERON:0004765!2.06e-14!101;UBERON:0001434!2.06e-14!101;UBERON:0002390!4.45e-14!102;UBERON:0003061!4.45e-14!102;UBERON:0002193!4.99e-12!112;UBERON:0002384!7.65e-10!375;UBERON:0002405!9.46e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TUBB1 | |short_description=p3@TUBB1 | ||
}} | }} |
Latest revision as of 06:37, 17 September 2015
Short description: | p3@TUBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TUBB1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -232bp_to_JF432703_5end |
EntrezGene: | TUBB1 |
HGNC: | 16257 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.14e-40 | 3 |
natural killer cell | 1.96e-40 | 3 |
pro-NK cell | 1.96e-40 | 3 |
leukocyte | 1.72e-17 | 136 |
granulocyte | 1.05e-15 | 8 |
hematopoietic oligopotent progenitor cell | 1.47e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-14 | 161 |
hematopoietic stem cell | 6.84e-14 | 168 |
hematopoietic cell | 4.13e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 5.49e-12 | 120 |
blood cell | 1.37e-11 | 11 |
mast cell | 1.95e-11 | 5 |
basophil mast progenitor cell | 1.95e-11 | 5 |
myeloid leukocyte | 8.81e-11 | 72 |
B cell | 2.39e-09 | 14 |
lymphoid lineage restricted progenitor cell | 5.04e-09 | 52 |
lymphocyte | 7.57e-09 | 53 |
common lymphoid progenitor | 7.57e-09 | 53 |
nongranular leukocyte | 2.55e-08 | 115 |
myeloid cell | 5.90e-07 | 108 |
common myeloid progenitor | 5.90e-07 | 108 |
endocrine cell | 9.64e-07 | 9 |