FFCP PHASE1:Hg19::chr6:85473227..85473243,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9096 | |EntrezGene=9096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11595 | |HGNC=11595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000416980_5end | |association_with_transcript=-49bp_to_ENST00000416980_5end | ||
|cluster_id=chr6:85473227..85473243,- | |||
|description=CAGE_peak_5_at_TBX18_5end | |description=CAGE_peak_5_at_TBX18_5end | ||
|id=chr6:85473227..85473243,- | |id=chr6:85473227..85473243,- | ||
|ontology_enrichment_celltype=CL:0000055!2.48e-19!180;CL:0000222!1.18e-17!119;CL:0000057!1.29e-17!75;CL:0000213!9.03e-12!57;CL:0000215!9.03e-12!57;CL:0002620!1.93e-11!23;CL:0000077!8.05e-11!19;CL:0000076!7.74e-09!62;CL:0000144!8.31e-09!625;CL:0002139!3.28e-08!24;CL:0000071!4.75e-08!18;CL:0002546!4.75e-08!18;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000548!1.48e-07!679;CL:0000004!1.48e-07!679;CL:0000255!1.48e-07!679;CL:0000187!2.13e-07!54;CL:0000012!2.94e-07!682 | |ontology_enrichment_celltype=CL:0000055!2.48e-19!180;CL:0000222!1.18e-17!119;CL:0000057!1.29e-17!75;CL:0000213!9.03e-12!57;CL:0000215!9.03e-12!57;CL:0002620!1.93e-11!23;CL:0000077!8.05e-11!19;CL:0000076!7.74e-09!62;CL:0000144!8.31e-09!625;CL:0002139!3.28e-08!24;CL:0000071!4.75e-08!18;CL:0002546!4.75e-08!18;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000548!1.48e-07!679;CL:0000004!1.48e-07!679;CL:0000255!1.48e-07!679;CL:0000187!2.13e-07!54;CL:0000012!2.94e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.06e-12;19!CL:0002537;4.76e-11;5!CL:0002551;3.87e-09;6!CL:0000349;1.65e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.67e-12,19;CL:0000213,4.37e-12,58;CL:0000215,4.37e-12,58;CL:0000222,1.47e-11,121;CL:0002537,1.17e-10,5;CL:0002551,2.24e-09,6;CL:0000349,2.56e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.14e-11!79;UBERON:0007798!9.14e-11!79;UBERON:0004872!2.93e-10!84;UBERON:0000914!1.30e-09!83;UBERON:0002329!1.30e-09!83;UBERON:0003077!1.30e-09!83;UBERON:0003059!1.30e-09!83;UBERON:0007282!1.30e-09!83;UBERON:0009618!1.30e-09!83;UBERON:0007285!1.30e-09!83;UBERON:0004535!5.75e-09!110;UBERON:0004290!7.48e-09!70;UBERON:0000055!1.17e-08!69;UBERON:0001009!2.62e-08!113;UBERON:0001986!4.75e-08!18;UBERON:0004638!4.75e-08!18;UBERON:0004852!4.75e-08!18;UBERON:0001981!1.75e-07!60;UBERON:0007500!1.75e-07!60;UBERON:0004537!1.75e-07!60;UBERON:0006965!1.75e-07!60;UBERON:0000486!3.69e-07!82;UBERON:0000487!5.83e-07!22;UBERON:0001134!6.63e-07!61;UBERON:0002036!6.63e-07!61;UBERON:0003082!6.63e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;9.34e-12;7!UBERON:0005631;4.04e-08;10!UBERON:0000158;4.04e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,2.50e-14,8;UBERON:0000305,2.26e-11,7;UBERON:0005631,2.74e-10,14;UBERON:0000158,2.74e-10,14 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0.873765488520689,1.31883489114227,0.618831764800233,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.511450247374121,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,2.82653970962005,0.419499436209906,0.825354125820202,0.626984899610432,0,0,0,0.805658634218294,0,0.732186172644509,0.367663080345869,1.62028389576352,0.803697554556718,1.12264686313085,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0,1.2663051166458,0.794455084879313,0,0.709336764396714,0.560677600142307,0,0,1.55605517699883,0.67355336034844,1.47115712802113,0.302714855289863,0.576175924479999,2.57753575017176,0.312160076830321,1.71141546463335,0.896692083310806,2.58355897016283,1.61872944368132,2.52811452064047,1.63323337003915,0,0.929932030581889,1.18800285728205,0,0.910161361938026,0.718618141816238,1.17835279767846,0.250237039743928,1.38532057742091,0,0,0.300476117813194,0.680593098960126,0.358779271377724,0,0.211931901159562,0.600182192168805,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,0.757301322732344,0.0920498986422993,1.93975268182574,0.355009592516614,0.302256294682921,0.508681776931463,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.821860859650752,1.01056513432752,1.38895653772983,1.52203321787679,0,0,0,0,0,0,0,0.425325291727159,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35475277125258,0.87192013766656,2.7868548611961,0.387815147273333,0,0,0,1.04007436911366,0.514414748524284,0,0.799266537048298,0.142977993658148,0.542621605391443,0,1.62868092146868,0,0,4.52159065589379,2.61460037580088,0.99972991182057,0,0,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0.500170521059677,0,0.415941723061614,0.178428988797162,0.315404830067869,0.585707074963566,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.781952530212746,0,0.686286847621712,0,0,0,1.5156378572313,0,1.20956117331872,0.992431231275107,0.767309866440312,0.561320188866147,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0.519254429183621,0.348631135379878,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915694648183434,0.495056999523528,0,0,3.21367859688319,0.193341436584244,0.770243085573222,0.15350367472613,0.413509717453592,1.28904293841928,1.59518363305651,0.596586391912706,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,2.60510858551767,1.58189712359363,0.571890581771475,0.255897791311334,0.42793898803392,0,0.78494864019923,0.179872457583315,0,0.471249609382746,0.202182481573316,0,0,0,0.487426979262569,0,0.409499734223957,0.565621727814851,0,1.10273068709225,0,0.438450885253763,0,0,0.405820753925408,0.92947049429925,1.40847801266121,0.430234056612155,0.294747123039363,0.35667105148125,0.354761064070598,0,0,2.65631221636001,0.349934720244983,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0.500547425135725,0,0,0,0,0,0,0,0.439524537815682,0,0,0,2.3874448473769,1.18785872333055,3.07160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,1.43216939740487,0,0,0,1.11136990144637,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0.0769502585037971,0.91153644677601,0,0,0,0.31900115973192,0,0,0,0,0,0.902382642468723,0.588187602953219,1.1747511088309,1.70778359451767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,1.9542044523884,0.72581733978073,1.32930774541437,0,0.627865836814451,0,0,0.970722711091971,0,0,0,0,1.37588825977293,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0.586654148204409,0.480952921509202,0.426905989478705,0,0,0,0.343189995723929,0.432164393964449,1.73953549791606,0,0,0,0,0,0,0,0,1.71906176567983,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0,0,1.19760786519031,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.686520205190771,0.151230923763239,0.621748802331122,0.295710299979268,0.477890301491107,0,0.310525913752519,0,0.797525143673985,0,0,2.28483127301277,1.22061219961398,0.1818486592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| ||
|short_description=p5@TBX18 | |short_description=p5@TBX18 | ||
}} | }} |
Latest revision as of 00:53, 20 September 2015
Short description: | p5@TBX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBX18_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000416980_5end |
EntrezGene: | TBX18 |
HGNC: | 11595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.67e-12 | 19 |
lining cell | 4.37e-12 | 58 |
barrier cell | 4.37e-12 | 58 |
mesodermal cell | 1.47e-11 | 121 |
amnion mesenchymal stem cell | 1.17e-10 | 5 |
fibroblast of dermis | 2.24e-09 | 6 |
extraembryonic cell | 2.56e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 2.50e-14 | 8 |
amnion | 2.26e-11 | 7 |
extraembryonic membrane | 2.74e-10 | 14 |
membranous layer | 2.74e-10 | 14 |