FFCP PHASE1:Hg19::chr13:44596618..44596628,+: Difference between revisions
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|id=chr13:44596618..44596628,+
|short_description=p1@LINC00284
|description=CAGE_peak_1_at_LINC00284_5end
|association_with_transcript=0bp_to_ENST00000439707_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26981 | |HGNC=26981 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000439707_5end | |||
|cluster_id=chr13:44596618..44596628,+ | |||
|coexpression_cluster_id=C541 | |||
|description=CAGE_peak_1_at_LINC00284_5end | |||
|id=chr13:44596618..44596628,+ | |||
|ontology_enrichment_celltype=CL:0000313!1.10e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.91e-41;1!UBERON:0004872;5.38e-07;7 | |||
|ontology_enrichment_disease=DOID:2152!1.10e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.69e-21;2!DOID:4362;3.22e-09;5!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7!DOID:120;7.45e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.66e-21,2;DOID:4362,3.22e-09,5;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7;DOID:120,7.24e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0003127!9.74e-14!2;UBERON:0000341!3.39e-13!2;UBERON:0005156!1.77e-10!59;UBERON:0000990!1.77e-10!59;UBERON:0000995!2.97e-10!21;UBERON:0005795!9.25e-10!22;UBERON:0003975!9.25e-10!22;UBERON:0003134!1.41e-09!37;UBERON:0000474!1.41e-09!37;UBERON:0003100!1.58e-08!41;UBERON:0004175!1.61e-08!25;UBERON:0004911!1.10e-07!1;UBERON:0002372!2.66e-07!1;UBERON:0001961!2.66e-07!1;UBERON:0001744!2.66e-07!1;UBERON:0001735!2.66e-07!1;UBERON:0006834!2.83e-07!1;UBERON:0003133!4.09e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.80e-11;4!UBERON:0000002;6.78e-08;6!UBERON:0001560;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0000995,1.42e-08,21;UBERON:0005795,3.15e-08,22;UBERON:0003975,3.15e-08,22;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6;UBERON:0004175,2.35e-07,25;UBERON:0003124,5.38e-07,7 | |||
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|short_description=p1@LINC00284 | |||
}} | }} |
Latest revision as of 10:50, 17 September 2015
Short description: | p1@LINC00284 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00284_5end |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | 0bp_to_ENST00000439707_5end |
EntrezGene: | NA |
HGNC: | 26981 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placenta | 2.80e-11 | 4 |
allantois | 2.80e-11 | 4 |
uterus | 1.42e-08 | 21 |
embryonic uterus | 3.15e-08 | 22 |
internal female genitalia | 3.15e-08 | 22 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
internal genitalia | 2.35e-07 | 25 |
chorion | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.66e-21 | 2 |
cervical cancer | 3.22e-09 | 5 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |
female reproductive organ cancer | 7.24e-07 | 27 |