FFCP PHASE1:Hg19::chr7:45952705..45952723,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_S56205_5end | |association_with_transcript=-29bp_to_S56205_5end | ||
|cluster_id=chr7:45952705..45952723,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_9_at_IGFBP3_5end | |description=CAGE_peak_9_at_IGFBP3_5end | ||
|id=chr7:45952705..45952723,- | |id=chr7:45952705..45952723,- | ||
|ontology_enrichment_celltype=CL:0000055!1.67e-11!180;CL:0000499!4.88e-10!27;CL:0000057!4.91e-09!75;CL:0002620!1.06e-08!23;CL:0002334!1.29e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.67e-11!180;CL:0000499!4.88e-10!27;CL:0000057!4.91e-09!75;CL:0002620!1.06e-08!23;CL:0002334!1.29e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.65e-16;23!CL:0000153;5.04e-11;9!CL:0000447;5.04e-11;9!CL:0000499;9.36e-11;28!CL:0002334;6.33e-09;12!CL:0002595;2.23e-08;5!CL:0002615;2.24e-08;3!CL:0000327;4.20e-08;15!CL:0002579;4.43e-08;3!CL:0000135;5.07e-08;3!CL:0000388;5.07e-08;3!CL:0000138;6.13e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.01e-17,76;CL:0002620,1.58e-16,23;CL:0000153,5.06e-11,9;CL:0000447,5.06e-11,9;CL:0000048,1.05e-10,427;CL:0000499,1.18e-10,28;CL:0000723,2.45e-10,433;CL:0000034,7.36e-10,441;CL:0002334,4.86e-09,12;CL:0000134,1.36e-08,354;CL:0002615,2.03e-08,3;CL:0002595,2.42e-08,5;CL:0002320,3.59e-08,361;CL:0002579,3.98e-08,3;CL:0000327,4.14e-08,15;CL:0000058,6.14e-08,6;CL:0000138,6.14e-08,6;CL:0000135,6.81e-08,3;CL:0000388,6.81e-08,3;CL:0000136,4.13e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!7.94e-07!5;DOID:450!7.94e-07!5;DOID:66!7.94e-07!5;DOID:423!7.94e-07!5;DOID:0080000!7.94e-07!5;DOID:11722!7.94e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.39e-13;5!DOID:450;3.39e-13;5!DOID:66;3.39e-13;5!DOID:423;3.39e-13;5!DOID:0080000;3.39e-13;5!DOID:11722;3.39e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.75e-13,5;DOID:450,2.75e-13,5;DOID:66,2.75e-13,5;DOID:423,2.75e-13,5;DOID:0080000,2.75e-13,5;DOID:11722,2.75e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0004573!8.18e-08!33;UBERON:0004571!8.18e-08!33;UBERON:0003688!1.54e-07!6;UBERON:0002358!1.54e-07!6;UBERON:0003684!1.54e-07!6;UBERON:0001178!1.54e-07!6;UBERON:0004872!1.89e-07!84;UBERON:0001637!4.67e-07!42;UBERON:0003509!4.67e-07!42;UBERON:0004572!4.67e-07!42;UBERON:0004457!8.74e-07!12;UBERON:0000042!8.74e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.08e-17;9!UBERON:0000042;2.08e-17;9!UBERON:0003688;8.94e-15;6!UBERON:0002358;8.94e-15;6!UBERON:0003684;8.94e-15;6!UBERON:0001178;8.94e-15;6!UBERON:0003834;2.23e-08;5!UBERON:0001533;2.23e-08;5!UBERON:0002097;2.38e-08;41!UBERON:0007846;5.07e-08;3!UBERON:0000043;5.07e-08;3!UBERON:0007845;5.07e-08;3!UBERON:0002199;2.00e-07;46!UBERON:0002416;2.00e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.31e-15,6;UBERON:0002358,7.31e-15,6;UBERON:0003684,7.31e-15,6;UBERON:0001178,7.31e-15,6;UBERON:0004457,1.02e-12,12;UBERON:0000042,1.02e-12,12;UBERON:0002097,1.22e-10,41;UBERON:0002199,1.80e-10,46;UBERON:0002416,1.80e-10,46;UBERON:0003834,2.42e-08,5;UBERON:0001533,2.42e-08,5;UBERON:0007846,6.81e-08,3;UBERON:0000043,6.81e-08,3;UBERON:0007845,6.81e-08,3;UBERON:0002384,1.33e-07,371 | |||
|phase1_expression=1.63510541343501,2.35510576280081,2.96004248601539,7.00513088471913,2.23480547213644,3.48935409640147,0,0.631719873426831,0,0.491467873003018,0,0,0,0,0,0,0,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,55.6616294672232,26.0695713530663,52.579286382779,0.795285947051099,10.2193322763554,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,2.5326102332916,0.132409180813219,1.43418310374407,0.354668382198357,0.560677600142307,0,3.45334567784024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,4.48474089222155,2.98980344345994,6.14602513362729,3.30100205692843,4.94652140344507,4.89517026086695,6.14185625894246,0.675105328965065,3.41029518064195,8.07788077581166,7.17989209409935,1.2931684545505,8.52023022039874,7.95941575998358,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,1.96565443335525,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,2.1100756394171,0.871533458600294,0,0,0,0,0.718874566474748,0,0,1.15825045334063,1.84928690295345,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.87173775377726,1.42743191037729,0.157702415033935,0.937131319941706,0.300946099727719,2.27407504055985,2.0694614258501,0,0.553107505625109,0.260650843404249,0,0,0,0,0,0,0,3.0239029332968,1.48864684691266,0.153461973288062,2.80660094433074,3.20347873139252,3.07024349440022,1.60853921143608,1.48418066444991,0,2.66342587969691,0.492762936082855,0,0.813472649219715,0,0.40101294060657,0,2.41110341145674,0.182091168006717,1.04899531967539,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0.464845549297286,9.12955805808856,0,0,0.532306030317022,0,4.633105477598,1.43124886741991,0,0,0,0,0,1.59101623962968,0.78494864019923,0,0,0,0,0,0.421258456238981,0.48763373908959,0.974853958525138,1.05650146756755,0,0,1.13008116620243,1.65409603063837,11.2784625791007,11.3997230165978,0,0,0.202910376962704,0.6196469961995,0,0.143411352204052,0,0,0,12.4553504825622,8.23237232399755,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.43246690842614,2.07875276582847,1.84296421259539,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,4.97663340258892,0.179736702294654,0.358042349351218,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0.139423744278603,0.230850775511391,0,0,0,0,3.19001159731919,0.274792780205587,5.33034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0,0,0.859930162358083,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,4.59562102038899,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0.134366944973453,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0,0,0,1.43429871466276,0,0,0,0,9.77399283156683,1.72844298240254,0.979762080328227,0,0,0.170388021785422,0,0.293104467356165,1.32506888912221,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0.235265819698172,0,0,0,1.40227985908335,2.21922344601045,1.32582103692562,2.0125432140206,0.889811221596536,0,2.41969478021182,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0.150257608997218,1.90402606084398,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0.343395705182793,1.01024846629776,0,0,0,0,0.680117776536817,0,0,2.14906609297785,0.308801447160972,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0.318004350653419,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0.894336993477167,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,2.80705868584208,9.07728206985395,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52934403219035,0,0.128915775947154,0,0.178553938605658,0,0,0,0,0,0,0,0,1.0580536810308,1.11598505450025,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| ||
|short_description=p9@IGFBP3 | |short_description=p9@IGFBP3 | ||
}} | }} |
Latest revision as of 19:28, 18 September 2015
Short description: | p9@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -29bp_to_S56205_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.01e-17 | 76 |
skin fibroblast | 1.58e-16 | 23 |
GAG secreting cell | 5.06e-11 | 9 |
carbohydrate secreting cell | 5.06e-11 | 9 |
multi fate stem cell | 1.05e-10 | 427 |
stromal cell | 1.18e-10 | 28 |
somatic stem cell | 2.45e-10 | 433 |
stem cell | 7.36e-10 | 441 |
preadipocyte | 4.86e-09 | 12 |
mesenchymal cell | 1.36e-08 | 354 |
adipocyte of omentum tissue | 2.03e-08 | 3 |
smooth muscle cell of the subclavian artery | 2.42e-08 | 5 |
connective tissue cell | 3.59e-08 | 361 |
omentum preadipocyte | 3.98e-08 | 3 |
extracellular matrix secreting cell | 4.14e-08 | 15 |
chondroblast | 6.14e-08 | 6 |
chondrocyte | 6.14e-08 | 6 |
fibrocyte | 6.81e-08 | 3 |
tendon cell | 6.81e-08 | 3 |
fat cell | 4.13e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.31e-15 | 6 |
peritoneum | 7.31e-15 | 6 |
abdominal cavity | 7.31e-15 | 6 |
visceral peritoneum | 7.31e-15 | 6 |
cavity lining | 1.02e-12 | 12 |
serous membrane | 1.02e-12 | 12 |
skin of body | 1.22e-10 | 41 |
integument | 1.80e-10 | 46 |
integumental system | 1.80e-10 | 46 |
thoracic segment blood vessel | 2.42e-08 | 5 |
subclavian artery | 2.42e-08 | 5 |
dense regular connective tissue | 6.81e-08 | 3 |
tendon | 6.81e-08 | 3 |
regular connective tissue | 6.81e-08 | 3 |
connective tissue | 1.33e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.75e-13 | 5 |
myotonic disease | 2.75e-13 | 5 |
muscle tissue disease | 2.75e-13 | 5 |
myopathy | 2.75e-13 | 5 |
muscular disease | 2.75e-13 | 5 |
myotonic dystrophy | 2.75e-13 | 5 |