FFCP PHASE1:Hg19::chr13:99966942..99966957,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:99966942..99966957,+
|short_description=p7@UBAC2
|description=CAGE_peak_7_at_UBAC2_5end
|association_with_transcript=-4bp_to_ENST00000480738_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=337867 | |EntrezGene=337867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20486 | |HGNC=20486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000480738_5end | |||
|cluster_id=chr13:99966942..99966957,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_7_at_UBAC2_5end | |||
|id=chr13:99966942..99966957,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.48e-29!18;CL:0000789!3.48e-29!18;CL:0002420!3.48e-29!18;CL:0002419!3.48e-29!18;CL:0000790!3.48e-29!18;CL:0000084!2.35e-24!25;CL:0000827!2.35e-24!25;CL:0000625!9.70e-21!11;CL:0000838!2.16e-13!52;CL:0000542!5.19e-13!53;CL:0000051!5.19e-13!53;CL:0000624!4.11e-12!6;CL:0000738!1.04e-11!140;CL:0002087!2.45e-11!119;CL:0002031!3.16e-08!124;CL:0000988!3.68e-08!182;CL:0000037!4.47e-08!172;CL:0000566!4.47e-08!172;CL:0000080!2.42e-07!6;CL:0002032!4.81e-07!165;CL:0000837!4.81e-07!165;CL:0000898!5.45e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.10e-69;18!CL:0000789;5.10e-69;18!CL:0002419;5.10e-69;18!CL:0000084;1.44e-48;25!CL:0000625;6.21e-48;11!CL:0000624;8.28e-27;6!CL:0000898;1.53e-14;3!CL:0000542;2.28e-11;53!CL:0000815;3.51e-10;2!CL:0000792;3.51e-10;2!CL:0002677;3.51e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.35e-69,18;CL:0000789,4.35e-69,18;CL:0002420,4.35e-69,18;CL:0002419,4.35e-69,18;CL:0000790,4.35e-69,18;CL:0000084,1.29e-48,25;CL:0000827,1.29e-48,25;CL:0000625,7.34e-48,11;CL:0000624,5.93e-27,6;CL:0000838,2.75e-21,52;CL:0000542,8.23e-21,53;CL:0000051,8.23e-21,53;CL:0000898,1.25e-14,3;CL:0000815,3.21e-10,2;CL:0000792,3.21e-10,2;CL:0002677,3.21e-10,2;CL:0002087,1.75e-08,115;CL:0002031,5.68e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;5.10e-69;18!CL:0000051;2.28e-11;53 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.27e-19!115;UBERON:0000178!1.65e-18!15;UBERON:0000179!1.65e-18!15;UBERON:0000463!1.65e-18!15;UBERON:0002193!7.72e-08!112;UBERON:0001893!1.56e-07!34;UBERON:0001049!2.99e-07!57;UBERON:0005068!2.99e-07!57;UBERON:0006241!2.99e-07!57;UBERON:0007135!2.99e-07!57;UBERON:0002390!3.64e-07!102;UBERON:0003061!3.64e-07!102;UBERON:0002791!8.82e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.95e-17;15!UBERON:0000179;2.95e-17;15!UBERON:0000463;2.95e-17;15!UBERON:0002390;6.77e-09;32!UBERON:0002193;5.99e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.71e-17,15;UBERON:0000179,3.71e-17,15;UBERON:0000463,3.71e-17,15 | |||
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| ||
|short_description=p7@UBAC2 | |||
}} | }} |
Latest revision as of 08:46, 18 September 2015
Short description: | p7@UBAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UBAC2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -4bp_to_ENST00000480738_5end |
EntrezGene: | UBAC2 |
HGNC: | 20486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.35e-69 | 18 |
alpha-beta T cell | 4.35e-69 | 18 |
immature T cell | 4.35e-69 | 18 |
mature T cell | 4.35e-69 | 18 |
immature alpha-beta T cell | 4.35e-69 | 18 |
T cell | 1.29e-48 | 25 |
pro-T cell | 1.29e-48 | 25 |
CD8-positive, alpha-beta T cell | 7.34e-48 | 11 |
CD4-positive, alpha-beta T cell | 5.93e-27 | 6 |
lymphoid lineage restricted progenitor cell | 2.75e-21 | 52 |
lymphocyte | 8.23e-21 | 53 |
common lymphoid progenitor | 8.23e-21 | 53 |
naive T cell | 1.25e-14 | 3 |
regulatory T cell | 3.21e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.21e-10 | 2 |
naive regulatory T cell | 3.21e-10 | 2 |
nongranular leukocyte | 1.75e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 5.68e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.71e-17 | 15 |
haemolymphatic fluid | 3.71e-17 | 15 |
organism substance | 3.71e-17 | 15 |