FFCP PHASE1:Hg19::chr7:5568084..5568101,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-355bp_to_ENST00000464611_5end | |association_with_transcript=-355bp_to_ENST00000464611_5end | ||
|cluster_id=chr7:5568084..5568101,- | |||
|coexpression_cluster_id=C1999 | |||
|description=CAGE_peak_14_at_ACTB_5end | |description=CAGE_peak_14_at_ACTB_5end | ||
|id=chr7:5568084..5568101,- | |id=chr7:5568084..5568101,- | ||
|ontology_enrichment_celltype=CL:0002371!4.26e-19!591;CL:0000144!1.65e-18!625;CL:0000548!1.05e-15!679;CL:0000004!1.05e-15!679;CL:0000255!1.05e-15!679;CL:0000012!2.10e-15!682;CL:0000003!1.20e-12!722;CL:0000048!1.90e-12!430;CL:0000723!2.57e-12!436;CL:0000034!7.40e-12!444;CL:0000192!6.77e-11!42;CL:0000514!6.77e-11!42;CL:0000393!3.37e-10!60;CL:0000211!3.37e-10!60;CL:0000183!3.80e-09!59;CL:0000680!9.41e-09!57;CL:0000056!9.41e-09!57;CL:0000355!9.41e-09!57;CL:0000187!1.54e-08!54;CL:0000222!2.04e-08!119;CL:0000359!2.18e-08!32;CL:0000055!4.18e-08!180;CL:0000063!8.51e-07!578 | |ontology_enrichment_celltype=CL:0002371!4.26e-19!591;CL:0000144!1.65e-18!625;CL:0000548!1.05e-15!679;CL:0000004!1.05e-15!679;CL:0000255!1.05e-15!679;CL:0000012!2.10e-15!682;CL:0000003!1.20e-12!722;CL:0000048!1.90e-12!430;CL:0000723!2.57e-12!436;CL:0000034!7.40e-12!444;CL:0000192!6.77e-11!42;CL:0000514!6.77e-11!42;CL:0000393!3.37e-10!60;CL:0000211!3.37e-10!60;CL:0000183!3.80e-09!59;CL:0000680!9.41e-09!57;CL:0000056!9.41e-09!57;CL:0000355!9.41e-09!57;CL:0000187!1.54e-08!54;CL:0000222!2.04e-08!119;CL:0000359!2.18e-08!32;CL:0000055!4.18e-08!180;CL:0000063!8.51e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.08e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.43e-12,427;CL:0000723,2.14e-12,433;CL:0000034,6.85e-12,441;CL:0000192,4.15e-10,43;CL:0000514,4.15e-10,43;CL:0000393,9.01e-10,61;CL:0000211,9.01e-10,61;CL:0000680,2.40e-08,58;CL:0000056,2.40e-08,58;CL:0000355,2.40e-08,58;CL:0000359,2.48e-08,32;CL:0000222,2.97e-08,121;CL:0000187,4.03e-08,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.79e-10!216;UBERON:0002204!1.50e-09!167;UBERON:0000486!8.88e-08!82;UBERON:0000914!9.39e-08!83;UBERON:0002329!9.39e-08!83;UBERON:0003077!9.39e-08!83;UBERON:0003059!9.39e-08!83;UBERON:0007282!9.39e-08!83;UBERON:0009618!9.39e-08!83;UBERON:0007285!9.39e-08!83;UBERON:0005256!1.24e-07!143;UBERON:0001637!1.50e-07!42;UBERON:0003509!1.50e-07!42;UBERON:0004572!1.50e-07!42;UBERON:0004290!1.55e-07!70;UBERON:0002385!2.72e-07!63;UBERON:0001015!2.72e-07!63;UBERON:0000383!2.72e-07!63;UBERON:0001134!3.07e-07!61;UBERON:0002036!3.07e-07!61;UBERON:0003082!3.07e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.38e-09,203;UBERON:0007503,5.83e-09,78;UBERON:0000926,1.18e-08,315;UBERON:0004120,1.18e-08,315;UBERON:0006603,1.18e-08,315;UBERON:0002204,3.09e-08,167;UBERON:0001637,2.19e-07,42;UBERON:0003509,2.19e-07,42;UBERON:0004572,2.19e-07,42;UBERON:0000486,2.79e-07,83;UBERON:0007524,3.36e-07,73;UBERON:0002329,3.81e-07,71;UBERON:0003059,3.81e-07,71;UBERON:0007282,3.81e-07,71;UBERON:0004290,3.81e-07,71;UBERON:0009618,3.81e-07,71;UBERON:0003077,5.16e-07,72;UBERON:0007285,5.16e-07,72;UBERON:0002385,6.50e-07,64;UBERON:0001015,6.50e-07,64;UBERON:0000383,6.50e-07,64;UBERON:0001134,7.43e-07,62;UBERON:0002036,7.43e-07,62;UBERON:0003082,7.43e-07,62 | |||
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| ||
|short_description=p14@ACTB | |short_description=p14@ACTB | ||
}} | }} |
Latest revision as of 02:02, 19 September 2015
Short description: | p14@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ACTB_5end |
Coexpression cluster: | C1999_Neutrophils_Alveolar_Olfactory_Smooth_Monocytederived_Renal_Dendritic |
Association with transcript: | -355bp_to_ENST00000464611_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.43e-12 | 427 |
somatic stem cell | 2.14e-12 | 433 |
stem cell | 6.85e-12 | 441 |
smooth muscle cell | 4.15e-10 | 43 |
smooth muscle myoblast | 4.15e-10 | 43 |
electrically responsive cell | 9.01e-10 | 61 |
electrically active cell | 9.01e-10 | 61 |
muscle precursor cell | 2.40e-08 | 58 |
myoblast | 2.40e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.40e-08 | 58 |
vascular associated smooth muscle cell | 2.48e-08 | 32 |
mesodermal cell | 2.97e-08 | 121 |
muscle cell | 4.03e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.38e-09 | 203 |
epithelial vesicle | 5.83e-09 | 78 |
mesoderm | 1.18e-08 | 315 |
mesoderm-derived structure | 1.18e-08 | 315 |
presumptive mesoderm | 1.18e-08 | 315 |
musculoskeletal system | 3.09e-08 | 167 |
artery | 2.19e-07 | 42 |
arterial blood vessel | 2.19e-07 | 42 |
arterial system | 2.19e-07 | 42 |
multilaminar epithelium | 2.79e-07 | 83 |
dense mesenchyme tissue | 3.36e-07 | 73 |
somite | 3.81e-07 | 71 |
presomitic mesoderm | 3.81e-07 | 71 |
presumptive segmental plate | 3.81e-07 | 71 |
dermomyotome | 3.81e-07 | 71 |
trunk paraxial mesoderm | 3.81e-07 | 71 |
paraxial mesoderm | 5.16e-07 | 72 |
presumptive paraxial mesoderm | 5.16e-07 | 72 |
muscle tissue | 6.50e-07 | 64 |
musculature | 6.50e-07 | 64 |
musculature of body | 6.50e-07 | 64 |
skeletal muscle tissue | 7.43e-07 | 62 |
striated muscle tissue | 7.43e-07 | 62 |
myotome | 7.43e-07 | 62 |