FFCP PHASE1:Hg19::chr2:102091514..102091528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=731220 | |EntrezGene=731220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37253 | |HGNC=37253 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZV50,E9PDA6 | |UniProt=Q6ZV50,E9PDA6 | ||
|association_with_transcript=-349bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end | |association_with_transcript=-349bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end | ||
|cluster_id=chr2:102091514..102091528,- | |||
|coexpression_cluster_id=C4110 | |||
|description=CAGE_peak_6_at_RFX8_5end | |description=CAGE_peak_6_at_RFX8_5end | ||
|id=chr2:102091514..102091528,- | |id=chr2:102091514..102091528,- | ||
|ontology_enrichment_celltype=CL:0000048!4.12e-26!430;CL:0000034!2.19e-25!444;CL:0000723!3.72e-25!436;CL:0000134!1.77e-19!358;CL:0002320!2.00e-18!365;CL:0000219!1.40e-16!390;CL:0002620!1.31e-14!23;CL:0000055!1.84e-14!180;CL:0000057!1.87e-13!75;CL:0002371!1.07e-11!591;CL:0000144!9.91e-10!625;CL:0002551!2.77e-08!6;CL:0000763!3.30e-08!112;CL:0000049!3.30e-08!112;CL:0000188!1.02e-07!9;CL:0002570!3.48e-07!8;CL:0000012!5.28e-07!682 | |ontology_enrichment_celltype=CL:0000048!4.12e-26!430;CL:0000034!2.19e-25!444;CL:0000723!3.72e-25!436;CL:0000134!1.77e-19!358;CL:0002320!2.00e-18!365;CL:0000219!1.40e-16!390;CL:0002620!1.31e-14!23;CL:0000055!1.84e-14!180;CL:0000057!1.87e-13!75;CL:0002371!1.07e-11!591;CL:0000144!9.91e-10!625;CL:0002551!2.77e-08!6;CL:0000763!3.30e-08!112;CL:0000049!3.30e-08!112;CL:0000188!1.02e-07!9;CL:0002570!3.48e-07!8;CL:0000012!5.28e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.62e-15;23!CL:0002582;2.86e-12;3!CL:0002551;2.32e-10;6!CL:0001014;8.80e-09;2!CL:0002583;8.80e-09;2!CL:0001016;8.80e-09;2!CL:0002334;7.06e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.53e-15,23;CL:0000048,2.94e-13,427;CL:0000723,6.28e-13,433;CL:0000034,1.67e-12,441;CL:0000134,3.35e-12,354;CL:0000219,5.98e-12,386;CL:0002582,6.44e-12,3;CL:0002320,8.97e-12,361;CL:0002551,1.10e-10,6;CL:0000057,2.81e-09,76;CL:0001014,7.57e-09,2;CL:0001016,7.57e-09,2;CL:0002583,1.21e-08,2;CL:0002334,1.09e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.23e-07!14 | |ontology_enrichment_disease=DOID:2394!8.23e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.31e-17!375;UBERON:0002204!1.10e-10!167;UBERON:0002199!3.63e-10!45;UBERON:0002416!3.63e-10!45;UBERON:0002097!9.09e-09!40;UBERON:0000914!9.10e-09!83;UBERON:0002329!9.10e-09!83;UBERON:0003077!9.10e-09!83;UBERON:0003059!9.10e-09!83;UBERON:0007282!9.10e-09!83;UBERON:0009618!9.10e-09!83;UBERON:0007285!9.10e-09!83;UBERON:0004290!3.00e-08!70;UBERON:0002067!6.25e-07!9;UBERON:0004016!6.25e-07!9;UBERON:0010083!6.25e-07!9 | |ontology_enrichment_uberon=UBERON:0002384!5.31e-17!375;UBERON:0002204!1.10e-10!167;UBERON:0002199!3.63e-10!45;UBERON:0002416!3.63e-10!45;UBERON:0002097!9.09e-09!40;UBERON:0000914!9.10e-09!83;UBERON:0002329!9.10e-09!83;UBERON:0003077!9.10e-09!83;UBERON:0003059!9.10e-09!83;UBERON:0007282!9.10e-09!83;UBERON:0009618!9.10e-09!83;UBERON:0007285!9.10e-09!83;UBERON:0004290!3.00e-08!70;UBERON:0002067!6.25e-07!9;UBERON:0004016!6.25e-07!9;UBERON:0010083!6.25e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.38e-10;9!UBERON:0002199;1.10e-07;46!UBERON:0002416;1.10e-07;46!UBERON:0002097;1.75e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.70e-11,46;UBERON:0002416,1.70e-11,46;UBERON:0002384,3.43e-11,371;UBERON:0002067,1.29e-10,9;UBERON:0004016,1.29e-10,9;UBERON:0010083,1.29e-10,9;UBERON:0002097,2.32e-09,41 | |||
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| ||
|short_description=p6@RFX8 | |short_description=p6@RFX8 | ||
}} | }} |
Latest revision as of 00:08, 16 September 2015
Short description: | p6@RFX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RFX8_5end |
Coexpression cluster: | C4110_schwannoma_Fibroblast_Hodgkin_Skeletal_biphenotypic_myxofibrosarcoma_Preadipocyte |
Association with transcript: | -349bp_to_ENST00000428343, ENST00000481179, NM_001145664, uc002tbb.1, uc010yvx.1_5end |
EntrezGene: | RFX8 |
HGNC: | 37253 |
UniProt: | Q6ZV50E9PDA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.53e-15 | 23 |
multi fate stem cell | 2.94e-13 | 427 |
somatic stem cell | 6.28e-13 | 433 |
stem cell | 1.67e-12 | 441 |
mesenchymal cell | 3.35e-12 | 354 |
motile cell | 5.98e-12 | 386 |
visceral preadipocyte | 6.44e-12 | 3 |
connective tissue cell | 8.97e-12 | 361 |
fibroblast of dermis | 1.10e-10 | 6 |
fibroblast | 2.81e-09 | 76 |
CD1a-positive Langerhans cell | 7.57e-09 | 2 |
immature CD1a-positive Langerhans cell | 7.57e-09 | 2 |
subcutaneous preadipocyte | 1.21e-08 | 2 |
preadipocyte | 1.09e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 1.70e-11 | 46 |
integumental system | 1.70e-11 | 46 |
connective tissue | 3.43e-11 | 371 |
dermis | 1.29e-10 | 9 |
dermatome | 1.29e-10 | 9 |
future dermis | 1.29e-10 | 9 |
skin of body | 2.32e-09 | 41 |