FFCP PHASE1:Hg19::chr14:100841794..100841827,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:100841794..100841827,-
|short_description=p3@WARS
|description=CAGE_peak_3_at_WARS_5end
|association_with_transcript=0bp_to_ENST00000553808,ENST0000055482...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7453 | |EntrezGene=7453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12729 | |HGNC=12729 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2C0,G3V3R3,G3V4Q0 | |UniProt=G3V2C0,G3V3R3,G3V4Q0 | ||
|association_with_transcript=0bp_to_ENST00000553808,ENST00000554820,ENST00000556295,ENST00000557094,ENST00000557347_5end | |||
|cluster_id=chr14:100841794..100841827,- | |||
|description=CAGE_peak_3_at_WARS_5end | |||
|id=chr14:100841794..100841827,- | |||
|ontology_enrichment_celltype=CL:0000548!9.59e-26!679;CL:0000004!9.59e-26!679;CL:0000255!9.59e-26!679;CL:0000012!7.22e-25!682;CL:0000144!5.50e-18!625;CL:0000063!1.70e-16!578;CL:0002371!7.18e-14!591;CL:0000003!6.58e-13!722;CL:0002057!3.38e-11!42;CL:0000860!9.99e-11!45;CL:0000055!2.18e-10!180;CL:0000222!1.11e-09!119;CL:0002139!3.11e-08!24;CL:0000048!4.90e-08!430;CL:0000213!7.83e-08!57;CL:0000215!7.83e-08!57;CL:0000057!1.46e-07!75;CL:0002078!1.75e-07!44;CL:0000115!1.77e-07!35;CL:0000723!2.38e-07!436;CL:0000034!5.40e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-08;33!CL:0002057;1.57e-08;33!CL:0002139;3.28e-08;24!CL:0000473;5.89e-07;39!CL:0000234;5.89e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.32e-11,42;CL:0002057,3.32e-11,42;CL:0000473,8.73e-11,48;CL:0000234,8.73e-11,48;CL:0000222,2.10e-10,121;CL:0000213,2.93e-08,58;CL:0000215,2.93e-08,58;CL:0002139,3.07e-08,24;CL:0000048,5.50e-08,427;CL:0002078,6.19e-08,45;CL:0000115,6.38e-08,36;CL:0000057,1.33e-07,76;CL:0000723,2.55e-07,433;CL:0000034,6.07e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.20e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.73e-10!216;UBERON:0001009!8.70e-10!113;UBERON:0004535!9.23e-10!110;UBERON:0002049!1.56e-09!79;UBERON:0007798!1.56e-09!79;UBERON:0000055!5.47e-09!69;UBERON:0004872!9.11e-09!84;UBERON:0000926!1.28e-08!448;UBERON:0004120!1.28e-08!448;UBERON:0006603!1.28e-08!448;UBERON:0003914!5.37e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.58e-11,315;UBERON:0004120,3.58e-11,315;UBERON:0006603,3.58e-11,315;UBERON:0003081,7.00e-10,203;UBERON:0001009,9.35e-10,112;UBERON:0004535,9.90e-10,109;UBERON:0002049,1.62e-09,78;UBERON:0007798,1.62e-09,78;UBERON:0000055,5.86e-09,68;UBERON:0004872,9.64e-09,83 | |||
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| ||
|short_description=p3@WARS | |||
}} | }} |
Latest revision as of 10:19, 18 September 2015
Short description: | p3@WARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000553808, ENST00000554820, ENST00000556295, ENST00000557094, ENST00000557347_5end |
EntrezGene: | WARS |
HGNC: | 12729 |
UniProt: | G3V2C0G3V3R3G3V4Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.32e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.32e-11 | 42 |
defensive cell | 8.73e-11 | 48 |
phagocyte | 8.73e-11 | 48 |
mesodermal cell | 2.10e-10 | 121 |
lining cell | 2.93e-08 | 58 |
barrier cell | 2.93e-08 | 58 |
endothelial cell of vascular tree | 3.07e-08 | 24 |
multi fate stem cell | 5.50e-08 | 427 |
meso-epithelial cell | 6.19e-08 | 45 |
endothelial cell | 6.38e-08 | 36 |
fibroblast | 1.33e-07 | 76 |
somatic stem cell | 2.55e-07 | 433 |
stem cell | 6.07e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.58e-11 | 315 |
mesoderm-derived structure | 3.58e-11 | 315 |
presumptive mesoderm | 3.58e-11 | 315 |
lateral plate mesoderm | 7.00e-10 | 203 |
circulatory system | 9.35e-10 | 112 |
cardiovascular system | 9.90e-10 | 109 |
vasculature | 1.62e-09 | 78 |
vascular system | 1.62e-09 | 78 |
vessel | 5.86e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 9.64e-09 | 83 |