FFCP PHASE1:Hg19::chr2:110253085..110253089,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:110253085..110253089,+ | |||
|description=CAGE_peak_at_chr2:110253085..110253089,+ | |description=CAGE_peak_at_chr2:110253085..110253089,+ | ||
|id=chr2:110253085..110253089,+ | |id=chr2:110253085..110253089,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.46e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.73e-21!34;UBERON:0003528!5.73e-21!34;UBERON:0001893!6.39e-21!34;UBERON:0002791!3.66e-20!33;UBERON:0001869!1.96e-19!32;UBERON:0001049!1.18e-18!57;UBERON:0005068!1.18e-18!57;UBERON:0006241!1.18e-18!57;UBERON:0007135!1.18e-18!57;UBERON:0001017!1.67e-18!82;UBERON:0002780!2.66e-18!41;UBERON:0001890!2.66e-18!41;UBERON:0006240!2.66e-18!41;UBERON:0005743!6.80e-18!86;UBERON:0003080!1.31e-17!42;UBERON:0000073!5.67e-17!94;UBERON:0001016!5.67e-17!94;UBERON:0002616!1.53e-16!59;UBERON:0007023!3.82e-16!115;UBERON:0000955!1.16e-15!69;UBERON:0006238!1.16e-15!69;UBERON:0000956!6.10e-14!25;UBERON:0000203!6.10e-14!25;UBERON:0002619!1.82e-13!22;UBERON:0003075!3.65e-13!86;UBERON:0007284!3.65e-13!86;UBERON:0002346!1.06e-12!90;UBERON:0001950!1.78e-11!20;UBERON:0003056!2.30e-11!61;UBERON:0002420!1.36e-09!9;UBERON:0007245!1.36e-09!9;UBERON:0010009!1.36e-09!9;UBERON:0010011!1.36e-09!9;UBERON:0000454!1.36e-09!9;UBERON:0000033!2.78e-09!123;UBERON:0002308!9.12e-09!9;UBERON:0000125!9.12e-09!9;UBERON:0000153!1.23e-08!129;UBERON:0007811!1.23e-08!129;UBERON:0004121!4.70e-08!169;UBERON:0000924!6.19e-08!173;UBERON:0006601!6.19e-08!173;UBERON:0009663!1.37e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.28e-17;22!UBERON:0000956;6.13e-15;25!UBERON:0000203;6.13e-15;25!UBERON:0002791;2.66e-14;32!UBERON:0001950;4.09e-13;20!UBERON:0003528;1.15e-12;34!UBERON:0002020;1.15e-12;34!UBERON:0002363;2.46e-12;1!UBERON:0002038;2.46e-12;1!UBERON:0009661;2.46e-12;1!UBERON:0002950;2.46e-12;1!UBERON:0001891;2.46e-12;1!UBERON:0001893;1.81e-11;34!UBERON:0001869;5.17e-11;32!UBERON:0002780;2.57e-10;41!UBERON:0001890;2.57e-10;41!UBERON:0001872;6.22e-10;5!UBERON:0002021;9.69e-10;5!UBERON:0000349;9.69e-10;5!UBERON:0001016;2.90e-09;83!UBERON:0001876;8.52e-07;2!UBERON:0002360;8.52e-07;2!UBERON:0001954;8.52e-07;2!UBERON:0000094;8.52e-07;2!UBERON:0003022;8.52e-07;2!UBERON:0002421;8.52e-07;2!UBERON:0002600;8.52e-07;2!UBERON:0010743;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.87e-17,22;UBERON:0002791,7.92e-16,32;UBERON:0000956,4.91e-15,25;UBERON:0000203,4.91e-15,25;UBERON:0003528,6.88e-15,34;UBERON:0002020,6.88e-15,34;UBERON:0001893,6.88e-15,34;UBERON:0001950,3.60e-13,20;UBERON:0002780,2.64e-12,41;UBERON:0001890,2.64e-12,41;UBERON:0003080,2.64e-12,41;UBERON:0006240,2.64e-12,41;UBERON:0002038,2.75e-12,1;UBERON:0009661,2.75e-12,1;UBERON:0002950,2.75e-12,1;UBERON:0001891,2.75e-12,1;UBERON:0009616,2.75e-12,1;UBERON:0010286,2.75e-12,1;UBERON:0002363,3.45e-12,1;UBERON:0007645,3.45e-12,1;UBERON:0007647,3.45e-12,1;UBERON:0010115,3.45e-12,1;UBERON:0001017,5.29e-12,81;UBERON:0001869,9.00e-12,32;UBERON:0001049,1.56e-11,56;UBERON:0005068,1.56e-11,56;UBERON:0006241,1.56e-11,56;UBERON:0007135,1.56e-11,56;UBERON:0001016,1.07e-10,89;UBERON:0000349,6.22e-10,5;UBERON:0002021,7.77e-10,5;UBERON:0001872,8.13e-10,5;UBERON:0000073,1.99e-09,53;UBERON:0002616,1.99e-09,53;UBERON:0000955,2.78e-09,68;UBERON:0006238,2.78e-09,68;UBERON:0003056,4.00e-08,61;UBERON:0003075,1.23e-07,82;UBERON:0007284,1.23e-07,82;UBERON:0002346,3.04e-07,86;UBERON:0001876,6.07e-07,2;UBERON:0001954,6.80e-07,2;UBERON:0003022,6.80e-07,2;UBERON:0002421,6.80e-07,2;UBERON:0002600,6.80e-07,2 | |||
|phase1_expression=0,0,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0.0764134057479513,0.57470412614962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0,0,0,0,0,0,0,0,0.14828656316206,0.535081656179426,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.71153252537342,0,0,0,0.732186172644509,0,0.81014194788176,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0.448346041655403,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,5.9832291840805,0,0,0,0,0.831883446123229,0.356857977594324,0.788512075169673,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0,0.966782203814463,0.725083469571143,0.426133137080504,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,2.73881614839831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,1.9882952955326,0.422008249231538,0.333926115068718,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,3.99227596002388,0,0,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0.265372693510018,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,1.26373159256976,0,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0.411125773940253,0,0.126621591911757,0,0,0,0,0,0.114536596165916,1.37275998289572,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,0.817220436669454,0,0,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0,0,0,0.886068179966986,0.366078794705889,0.3755727921195,0,0.332787154610557,0.434674820589684,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,1.34940933649081,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.478901577171454,0.41023272848151,1.51243017733031,0.138314504928436,0.645902582527404,0,0,0,0,0,0.381382095467167,0.690359926060101,0.198916222116275,0,0,0,0,0,0,0.337687923091973,0,1.03343398250592,0.380494861163441,4.92277328116398,0,0.992422356778588,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.271878931907327,0.0657727735628491,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.357382720883282,0.316027223465453,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.297046400327086,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,1.29005624836306,0,0.135982980381829,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0,0.202056159043763,0.0717222053926763,0.665320713092027,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0.0764134057479513,0.57470412614962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0,0,0,0,0,0,0,0,0.14828656316206,0.535081656179426,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.71153252537342,0,0,0,0.732186172644509,0,0.81014194788176,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0.448346041655403,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,5.9832291840805,0,0,0,0,0.831883446123229,0.356857977594324,0.788512075169673,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0,0.966782203814463,0.725083469571143,0.426133137080504,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,2.73881614839831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,1.9882952955326,0.422008249231538,0.333926115068718,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,3.99227596002388,0,0,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0.265372693510018,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,1.26373159256976,0,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0.411125773940253,0,0.126621591911757,0,0,0,0,0,0.114536596165916,1.37275998289572,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,0.817220436669454,0,0,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0,0,0,0.886068179966986,0.366078794705889,0.3755727921195,0,0.332787154610557,0.434674820589684,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,1.34940933649081,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.478901577171454,0.41023272848151,1.51243017733031,0.138314504928436,0.645902582527404,0,0,0,0,0,0.381382095467167,0.690359926060101,0.198916222116275,0,0,0,0,0,0,0.337687923091973,0,1.03343398250592,0.380494861163441,4.92277328116398,0,0.992422356778588,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.271878931907327,0.0657727735628491,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.357382720883282,0.316027223465453,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.297046400327086,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,1.29005624836306,0,0.135982980381829,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0,0.202056159043763,0.0717222053926763,0.665320713092027,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr2:110253085..110253089,+ | |short_description=p@chr2:110253085..110253089,+ | ||
}} | }} |
Latest revision as of 23:11, 28 July 2015
Short description: | p@chr2:110253085..110253089, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:110253085..110253089, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data