FFCP PHASE1:Hg19::chr2:114647785..114647796,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10096 | |EntrezGene=10096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=170 | |HGNC=170 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTI0 | |UniProt=B4DTI0 | ||
|association_with_transcript=85bp_to_ENST00000544784_5end | |association_with_transcript=85bp_to_ENST00000544784_5end | ||
|cluster_id=chr2:114647785..114647796,+ | |||
|description=CAGE_peak_4_at_ACTR3_5end | |description=CAGE_peak_4_at_ACTR3_5end | ||
|id=chr2:114647785..114647796,+ | |id=chr2:114647785..114647796,+ | ||
|ontology_enrichment_celltype=CL:0000048!9.78e-16!430;CL:0000034!7.01e-15!444;CL:0000766!7.45e-15!76;CL:0000723!9.73e-15!436;CL:0000839!5.92e-14!70;CL:0000134!7.43e-14!358;CL:0000763!8.13e-14!112;CL:0000049!8.13e-14!112;CL:0002057!1.01e-13!42;CL:0002320!5.37e-13!365;CL:0000557!7.58e-13!71;CL:0000219!4.92e-12!390;CL:0002009!7.95e-12!65;CL:0000860!1.93e-11!45;CL:0002194!2.96e-11!63;CL:0000576!2.96e-11!63;CL:0000040!2.96e-11!63;CL:0000559!2.96e-11!63;CL:0000144!5.56e-10!625;CL:0002371!7.58e-08!591 | |ontology_enrichment_celltype=CL:0000048!9.78e-16!430;CL:0000034!7.01e-15!444;CL:0000766!7.45e-15!76;CL:0000723!9.73e-15!436;CL:0000839!5.92e-14!70;CL:0000134!7.43e-14!358;CL:0000763!8.13e-14!112;CL:0000049!8.13e-14!112;CL:0002057!1.01e-13!42;CL:0002320!5.37e-13!365;CL:0000557!7.58e-13!71;CL:0000219!4.92e-12!390;CL:0002009!7.95e-12!65;CL:0000860!1.93e-11!45;CL:0002194!2.96e-11!63;CL:0000576!2.96e-11!63;CL:0000040!2.96e-11!63;CL:0000559!2.96e-11!63;CL:0000144!5.56e-10!625;CL:0002371!7.58e-08!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.88e-23;33!CL:0002057;4.88e-23;33!CL:0000473;5.06e-18;39!CL:0000234;5.06e-18;39!CL:0000576;4.09e-12;48!CL:0000766;1.62e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.47e-22,42;CL:0002057,5.47e-22,42;CL:0000473,7.53e-22,48;CL:0000234,7.53e-22,48;CL:0000839,1.12e-20,66;CL:0000766,5.20e-20,72;CL:0000557,1.25e-18,67;CL:0000763,1.28e-18,108;CL:0000049,1.28e-18,108;CL:0002009,4.65e-17,61;CL:0002194,8.26e-17,59;CL:0000576,8.26e-17,59;CL:0000040,8.26e-17,59;CL:0000559,8.26e-17,59;CL:0000048,5.92e-16,427;CL:0000034,3.34e-15,441;CL:0000723,3.54e-15,433;CL:0000134,1.40e-14,354;CL:0002320,1.22e-13,361;CL:0000219,8.54e-11,386;CL:0000988,3.40e-08,177;CL:0002032,7.33e-08,161;CL:0000837,7.33e-08,161;CL:0000037,2.42e-07,168;CL:0002031,5.13e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.74e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.40e-15!102;UBERON:0003061!7.40e-15!102;UBERON:0002193!8.66e-13!112;UBERON:0002384!1.89e-12!375;UBERON:0001474!1.10e-10!86;UBERON:0002371!1.85e-10!80;UBERON:0002204!2.23e-10!167;UBERON:0004765!3.80e-10!101;UBERON:0001434!3.80e-10!101;UBERON:0000178!1.29e-07!15;UBERON:0000179!1.29e-07!15;UBERON:0000463!1.29e-07!15;UBERON:0003081!2.98e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!7.40e-15!102;UBERON:0003061!7.40e-15!102;UBERON:0002193!8.66e-13!112;UBERON:0002384!1.89e-12!375;UBERON:0001474!1.10e-10!86;UBERON:0002371!1.85e-10!80;UBERON:0002204!2.23e-10!167;UBERON:0004765!3.80e-10!101;UBERON:0001434!3.80e-10!101;UBERON:0000178!1.29e-07!15;UBERON:0000179!1.29e-07!15;UBERON:0000463!1.29e-07!15;UBERON:0003081!2.98e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-10;15!UBERON:0000179;4.56e-10;15!UBERON:0000463;4.56e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-20,98;UBERON:0003061,1.97e-20,98;UBERON:0002193,1.13e-17,108;UBERON:0002371,1.47e-15,76;UBERON:0000926,4.34e-15,315;UBERON:0004120,4.34e-15,315;UBERON:0006603,4.34e-15,315;UBERON:0001474,2.15e-14,82;UBERON:0003081,1.50e-13,203;UBERON:0004765,2.56e-13,90;UBERON:0002384,5.52e-13,371;UBERON:0001434,3.25e-11,100;UBERON:0002405,5.72e-11,93;UBERON:0002204,2.65e-10,167;UBERON:0000178,2.79e-10,15;UBERON:0000179,2.79e-10,15;UBERON:0000463,2.79e-10,15 | |||
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| ||
|short_description=p4@ACTR3 | |short_description=p4@ACTR3 | ||
}} | }} |
Latest revision as of 13:44, 16 September 2015
Short description: | p4@ACTR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACTR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_ENST00000544784_5end |
EntrezGene: | ACTR3 |
HGNC: | 170 |
UniProt: | B4DTI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.47e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.47e-22 | 42 |
defensive cell | 7.53e-22 | 48 |
phagocyte | 7.53e-22 | 48 |
myeloid lineage restricted progenitor cell | 1.12e-20 | 66 |
myeloid leukocyte | 5.20e-20 | 72 |
granulocyte monocyte progenitor cell | 1.25e-18 | 67 |
myeloid cell | 1.28e-18 | 108 |
common myeloid progenitor | 1.28e-18 | 108 |
macrophage dendritic cell progenitor | 4.65e-17 | 61 |
monopoietic cell | 8.26e-17 | 59 |
monocyte | 8.26e-17 | 59 |
monoblast | 8.26e-17 | 59 |
promonocyte | 8.26e-17 | 59 |
multi fate stem cell | 5.92e-16 | 427 |
stem cell | 3.34e-15 | 441 |
somatic stem cell | 3.54e-15 | 433 |
mesenchymal cell | 1.40e-14 | 354 |
connective tissue cell | 1.22e-13 | 361 |
motile cell | 8.54e-11 | 386 |
hematopoietic cell | 3.40e-08 | 177 |
hematopoietic oligopotent progenitor cell | 7.33e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.33e-08 | 161 |
hematopoietic stem cell | 2.42e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 5.13e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-20 | 98 |
blood island | 1.97e-20 | 98 |
hemolymphoid system | 1.13e-17 | 108 |
bone marrow | 1.47e-15 | 76 |
mesoderm | 4.34e-15 | 315 |
mesoderm-derived structure | 4.34e-15 | 315 |
presumptive mesoderm | 4.34e-15 | 315 |
bone element | 2.15e-14 | 82 |
lateral plate mesoderm | 1.50e-13 | 203 |
skeletal element | 2.56e-13 | 90 |
connective tissue | 5.52e-13 | 371 |
skeletal system | 3.25e-11 | 100 |
immune system | 5.72e-11 | 93 |
musculoskeletal system | 2.65e-10 | 167 |
blood | 2.79e-10 | 15 |
haemolymphatic fluid | 2.79e-10 | 15 |
organism substance | 2.79e-10 | 15 |