FFCP PHASE1:Hg19::chr14:106322288..106322325,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:106322288..106322325,-
|short_description=p2@IGHM
|description=CAGE_peak_2_at_IGHM_5end
|association_with_transcript=0bp_to_ENST00000390559_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5541 | |HGNC=5541 | ||
|TSSclassifier=strong | |||
|UniProt=P01871 | |UniProt=P01871 | ||
|association_with_transcript=0bp_to_ENST00000390559_5end | |||
|cluster_id=chr14:106322288..106322325,- | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_2_at_IGHM_5end | |||
|id=chr14:106322288..106322325,- | |||
|ontology_enrichment_celltype=CL:0000945!7.40e-36!24;CL:0000826!7.40e-36!24;CL:0000236!2.92e-22!14;CL:0000542!6.90e-22!53;CL:0000051!6.90e-22!53;CL:0000838!1.32e-20!52;CL:0000738!7.45e-15!140;CL:0000037!1.01e-14!172;CL:0000566!1.01e-14!172;CL:0002087!3.83e-14!119;CL:0000988!4.07e-13!182;CL:0002032!2.70e-11!165;CL:0000837!2.70e-11!165;CL:0002031!2.09e-10!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.58e-55;24!CL:0000236;3.10e-31;13!CL:0000542;4.22e-15;53!CL:0000226;2.26e-08;3!CL:0000842;2.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.12e-55,24;CL:0000826,5.12e-55,24;CL:0000236,1.00e-33,14;CL:0000542,1.24e-23,53;CL:0000051,1.24e-23,53;CL:0000838,6.71e-22,52;CL:0002087,5.04e-12,115;CL:0000738,4.26e-09,136;CL:0000226,2.14e-08,3;CL:0000842,2.14e-08,3;CL:0000037,4.59e-08,168;CL:0002031,1.28e-07,120;CL:0000988,2.73e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.22e-15;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.64e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.53e-21!115;UBERON:0000178!4.72e-12!15;UBERON:0000179!4.72e-12!15;UBERON:0000463!4.72e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.01e-12;15!UBERON:0000179;1.01e-12;15!UBERON:0000463;1.01e-12;15!UBERON:0002390;4.40e-12;32!UBERON:0002193;7.90e-10;42!UBERON:0004177;3.33e-09;5!UBERON:0005057;3.33e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.53e-17,114;UBERON:0000178,1.15e-12,15;UBERON:0000179,1.15e-12,15;UBERON:0000463,1.15e-12,15 | |||
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| ||
|short_description=p2@IGHM | |||
}} | }} |
Latest revision as of 20:51, 18 September 2015
Short description: | p2@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IGHM_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | 0bp_to_ENST00000390559_5end |
EntrezGene: | NA |
HGNC: | 5541 |
UniProt: | P01871 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.12e-55 | 24 |
pro-B cell | 5.12e-55 | 24 |
B cell | 1.00e-33 | 14 |
lymphocyte | 1.24e-23 | 53 |
common lymphoid progenitor | 1.24e-23 | 53 |
lymphoid lineage restricted progenitor cell | 6.71e-22 | 52 |
nongranular leukocyte | 5.04e-12 | 115 |
leukocyte | 4.26e-09 | 136 |
single nucleate cell | 2.14e-08 | 3 |
mononuclear cell | 2.14e-08 | 3 |
hematopoietic stem cell | 4.59e-08 | 168 |
hematopoietic lineage restricted progenitor cell | 1.28e-07 | 120 |
hematopoietic cell | 2.73e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.53e-17 | 114 |
blood | 1.15e-12 | 15 |
haemolymphatic fluid | 1.15e-12 | 15 |
organism substance | 1.15e-12 | 15 |