FFCP PHASE1:Hg19::chr14:21944768..21944778,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:21944768..21944778,-
|short_description=p5@RAB2B
|description=CAGE_peak_5_at_RAB2B_5end
|association_with_transcript=53bp_to_ENST00000461909,NM_001163380,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84932 | |EntrezGene=84932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20246 | |HGNC=20246 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUD4,Q6NZ33 | |UniProt=B4DUD4,Q6NZ33 | ||
|association_with_transcript=53bp_to_ENST00000461909,NM_001163380,uc010tls.1_5end | |||
|cluster_id=chr14:21944768..21944778,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_5_at_RAB2B_5end | |||
|id=chr14:21944768..21944778,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.37e-14;6!CL:0002262;4.57e-08;2!CL:1000398;4.57e-08;2!CL:0002139;8.17e-08;24!CL:0000115;4.17e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.74e-14,6;CL:0002138,1.74e-14,6;CL:0005022,1.74e-14,6;CL:0000115,2.21e-09,36;CL:0002262,4.07e-08,2;CL:1000398,4.07e-08,2;CL:0002139,5.80e-08,24;CL:0002078,4.56e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;3.37e-14;6 | |||
|ontology_enrichment_disease=DOID:305!8.95e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-08!115;UBERON:0000178!8.20e-07!15;UBERON:0000179!8.20e-07!15;UBERON:0000463!8.20e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.42e-19;15!UBERON:0000179;3.42e-19;15!UBERON:0000463;3.42e-19;15!UBERON:0002193;1.29e-10;42!UBERON:0001473;1.42e-10;8!UBERON:0004536;1.42e-10;8!UBERON:0006558;1.42e-10;8!UBERON:0002465;2.15e-08;10!UBERON:0001281;4.57e-08;2!UBERON:0003497;4.57e-08;2!UBERON:0003909;4.57e-08;2!UBERON:0003835;4.57e-08;2!UBERON:0002390;2.04e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.69e-19,15;UBERON:0000179,3.69e-19,15;UBERON:0000463,3.69e-19,15;UBERON:0001473,8.73e-11,8;UBERON:0004536,8.73e-11,8;UBERON:0006558,8.73e-11,8;UBERON:0007023,1.26e-09,114;UBERON:0004535,2.34e-09,109;UBERON:0001009,5.66e-09,112;UBERON:0002465,1.47e-08,10;UBERON:0001281,4.07e-08,2;UBERON:0003497,4.07e-08,2;UBERON:0003909,4.07e-08,2;UBERON:0003835,4.07e-08,2 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,1.39560233594486,0.218441372130172,0,0.495065411840187,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0.687720651731561,1.06730766284929,0.236132343941038,0.393364276848904,0.383829398097213,0,0,0,0,0.232401601740905,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,0,0,0,0,0,3.96513985737078,0.560508562981536,0.526768169550154,0,0,0.205601498999509,0,0.32592226663359,0,0,0.222820913770347,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.443458794925128,0,0.458426764241994,0,0,0.649094787309367,0,0.26591592103773,0.715471872916026,0,0,0,0,0,0,0,0,0.208994966536811,1.55050055501597,1.06729878806013,0.66944122552934,1.20848795132744,1.52054421143703,0.976248230192678,0,0,0.625098097988558,0.22452937262617,0.112611480483322,1.53316637465883,0,0.183201743930407,1.31780417436063,0,0.872188104285069,0,0.12663051166458,0,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.773043412653187,1.09098448236334,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0.269662616320329,0,0.38474715694639,2.21446636387394,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0.368965315629341,0,0.219500570817251,0,0.301586917234893,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,1.58803092537181,2.31492756288305,1.90254152234598,0,0,0,0.234004265139238,0,1.87467667973554,0.503946384596579,0.708875486211932,0.358234090811393,0.581267877027924,0.383382679165211,0.492663237895943,0.176096868026452,0,0.288239906833923,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.1466765716419,0.517086863031111,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.224170287987055,0.591092280605782,0.431255149719035,0.256686072559497,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,0,0,0,0.315404830067869,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0.343143423810856,0.413536052245775,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,1.0877350463246,0.200506470303285,0.368323955743585,0.229628896329213,0,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0.680374821106063,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,1.13345112812495,0.0915694648183434,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0,0.379473173765715,0.349934720244983,0.384888450902048,0,0,1.31801321087491,0.86101074534246,0,0,0.229723400206959,13.1936378400364,12.9988325214204,10.2536493691349,4.2881719582402,2.05681136543097,9.07862635669804,11.8806916192385,9.51750211553125,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0.766021480529467,0.635020748171649,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0.37428108081644,1.90460633053462,0,1.11443384277478,0,0.71623345421307,0,0.614321404198464,0,0.140669416410513,0.445234820091624,1.48323486804084,0.63337622438398,0.796991953004279,0,0.755798243562828,0.102268682502155,0.492339221844278,0,0.359473404589307,0.895105873378046,0,0.690503839458535,7.18449277040819,0,0.969332746095218,0.185536196323703,0,0,0.437299999980979,1.44999915086959,0.682760689712998,0,0,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0.658156191461918,0.762569244632931,0.41827123283581,0.615602068030377,0.113942055847001,0,0.538545866458633,0.651884231532048,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0,0.476809736941136,0.210998064528027,1.14262965711403,0.424059214301822,0.216388639742091,0,0.53074538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| ||
|short_description=p5@RAB2B | |||
}} | }} |
Latest revision as of 02:55, 19 September 2015
Short description: | p5@RAB2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAB2B_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 53bp_to_ENST00000461909, NM_001163380, uc010tls.1_5end |
EntrezGene: | RAB2B |
HGNC: | 20246 |
UniProt: | B4DUD4Q6NZ33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.74e-14 | 6 |
endothelial cell of lymphatic vessel | 1.74e-14 | 6 |
vascular lymphangioblast | 1.74e-14 | 6 |
endothelial cell | 2.21e-09 | 36 |
endothelial cell of sinusoid | 4.07e-08 | 2 |
endothelial cell of hepatic sinusoid | 4.07e-08 | 2 |
endothelial cell of vascular tree | 5.80e-08 | 24 |
meso-epithelial cell | 4.56e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
blood | 3.69e-19 | 15 |
haemolymphatic fluid | 3.69e-19 | 15 |
organism substance | 3.69e-19 | 15 |
lymphatic vessel | 8.73e-11 | 8 |
lymph vasculature | 8.73e-11 | 8 |
lymphatic part of lymphoid system | 8.73e-11 | 8 |
adult organism | 1.26e-09 | 114 |
cardiovascular system | 2.34e-09 | 109 |
circulatory system | 5.66e-09 | 112 |
lymphoid system | 1.47e-08 | 10 |
hepatic sinusoid | 4.07e-08 | 2 |
abdomen blood vessel | 4.07e-08 | 2 |
sinusoid | 4.07e-08 | 2 |
abdominal segment blood vessel | 4.07e-08 | 2 |