FFCP PHASE1:Hg19::chr14:22978168..22978184,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:22978168..22978184,+
|short_description=p1@uc001wfe.2
|description=CAGE_peak_1_at_uc001wfe.2_5end
|association_with_transcript=-38bp_to_uc001wfe.2_5end
|...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_uc001wfe.2_5end | |||
|cluster_id=chr14:22978168..22978184,+ | |||
|coexpression_cluster_id=C1715 | |||
|description=CAGE_peak_1_at_uc001wfe.2_5end | |||
|id=chr14:22978168..22978184,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.46e-34!52;CL:0000542!1.49e-33!53;CL:0000051!1.49e-33!53;CL:0000791!1.99e-30!18;CL:0000789!1.99e-30!18;CL:0002420!1.99e-30!18;CL:0002419!1.99e-30!18;CL:0000790!1.99e-30!18;CL:0000625!1.02e-21!11;CL:0000084!6.14e-21!25;CL:0000827!6.14e-21!25;CL:0002087!1.99e-14!119;CL:0002031!1.96e-12!124;CL:0000945!6.27e-12!24;CL:0000826!6.27e-12!24;CL:0000738!3.33e-11!140;CL:0000898!1.57e-09!3;CL:0000624!2.85e-08!6;CL:0000037!7.32e-08!172;CL:0000566!7.32e-08!172;CL:0002032!1.03e-07!165;CL:0000837!1.03e-07!165;CL:0000988!4.49e-07!182;CL:0000815!7.00e-07!2;CL:0000792!7.00e-07!2;CL:0002677!7.00e-07!2;CL:0000893!9.19e-07!2;CL:0002489!9.19e-07!2;CL:0000809!9.19e-07!2;CL:0000808!9.19e-07!2;CL:0000894!9.19e-07!2;CL:0000806!9.19e-07!2;CL:0000807!9.19e-07!2;CL:0000805!9.19e-07!2;CL:0002425!9.19e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.14e-20;24!CL:0000946;1.69e-11;1!CL:0000786;1.69e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.04e-20,24;CL:0000826,6.04e-20,24;CL:0000946,1.78e-11,1;CL:0000786,1.78e-11,1;CL:0000980,1.78e-11,1;CL:0000838,2.01e-11,52;CL:0000542,3.45e-11,53;CL:0000051,3.45e-11,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.11e-15!7;UBERON:0002370!5.52e-13!4;UBERON:0005058!5.52e-13!4;UBERON:0009113!5.52e-13!4;UBERON:0003295!5.52e-13!4;UBERON:0005562!5.52e-13!4;UBERON:0003351!1.16e-08!6;UBERON:0001042!9.24e-08!10;UBERON:0009145!9.24e-08!10;UBERON:0006562!5.08e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.69e-21;2!UBERON:0005058;6.69e-21;2!UBERON:0009113;6.69e-21;2!UBERON:0004177;1.93e-18;5!UBERON:0005057;1.93e-18;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.74e-13,7;UBERON:0005057,1.74e-13,7;UBERON:0002370,5.18e-11,4;UBERON:0005058,5.18e-11,4;UBERON:0009113,5.18e-11,4;UBERON:0003295,5.18e-11,4;UBERON:0005562,5.18e-11,4;UBERON:0003351,1.25e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,4.26923065139718,5.03749000407547,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.822405995998037,3.51091640320424,0.32592226663359,0,0,2.1167986808183,0.294605907474837,0.443067789167242,2.43723477388514,1.5370958367081,1.95089021339817,1.15106533222573,1.65810010671509,0.869409257205157,0.444859689486181,0.535081656179426,0,1.81294948316106,0.383220493601921,0,1.51811815211702,0.637130828648193,0.651083453856419,0,0.602300476311091,0.895906278080929,1.24930726552346,0.947109008176067,0.821127996921047,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,2.18944576355981,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,1.89888196257365,0,0,0,0,0,0,0.946629373159108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90650094262028,1.73809200028402,0,0,0,0,0,0.942928742204225,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,4.26923065139718,5.03749000407547,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.822405995998037,3.51091640320424,0.32592226663359,0,0,2.1167986808183,0.294605907474837,0.443067789167242,2.43723477388514,1.5370958367081,1.95089021339817,1.15106533222573,1.65810010671509,0.869409257205157,0.444859689486181,0.535081656179426,0,1.81294948316106,0.383220493601921,0,1.51811815211702,0.637130828648193,0.651083453856419,0,0.602300476311091,0.895906278080929,1.24930726552346,0.947109008176067,0.821127996921047,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,2.18944576355981,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,1.89888196257365,0,0,0,0,0,0,0.946629373159108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90650094262028,1.73809200028402,0,0,0,0,0,0.942928742204225,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0.961705476909699 | ||
|short_description=p1@uc001wfe.2 | |||
}} | }} |
Latest revision as of 19:14, 24 July 2015
Short description: | p1@uc001wfe.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001wfe.2_5end |
Coexpression cluster: | C1715_CD4_xeroderma_B_splenic_thymus_b_non |
Association with transcript: | -38bp_to_uc001wfe.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.04e-20 | 24 |
pro-B cell | 6.04e-20 | 24 |
antibody secreting cell | 1.78e-11 | 1 |
plasma cell | 1.78e-11 | 1 |
plasmablast | 1.78e-11 | 1 |
lymphoid lineage restricted progenitor cell | 2.01e-11 | 52 |
lymphocyte | 3.45e-11 | 53 |
common lymphoid progenitor | 3.45e-11 | 53 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.74e-13 | 7 |
immune organ | 1.74e-13 | 7 |
thymus | 5.18e-11 | 4 |
hemolymphoid system gland | 5.18e-11 | 4 |
thymic region | 5.18e-11 | 4 |
pharyngeal gland | 5.18e-11 | 4 |
thymus primordium | 5.18e-11 | 4 |
pharyngeal epithelium | 1.25e-07 | 6 |