FFCP PHASE1:Hg19::chr2:188430478..188430496,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7035 | |EntrezGene=7035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11760 | |HGNC=11760 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQ14 | |UniProt=C9JQ14 | ||
|association_with_transcript=0bp_to_ENST00000421427_5end | |association_with_transcript=0bp_to_ENST00000421427_5end | ||
|cluster_id=chr2:188430478..188430496,- | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_16_at_TFPI_5end | |description=CAGE_peak_16_at_TFPI_5end | ||
|id=chr2:188430478..188430496,- | |id=chr2:188430478..188430496,- | ||
|ontology_enrichment_celltype=CL:0002322!1.01e-70!5;CL:0000540!6.70e-22!6;CL:0000031!6.70e-22!6;CL:0000404!6.70e-22!6;CL:0000039!3.01e-19!7;CL:0000586!3.01e-19!7;CL:0000047!1.34e-16!8;CL:0000148!1.82e-13!10;CL:0000541!1.82e-13!10;CL:0000147!8.70e-10!14;CL:0000133!3.93e-08!59;CL:0000710!5.23e-07!20;CL:0000221!9.69e-07!71 | |ontology_enrichment_celltype=CL:0002322!1.01e-70!5;CL:0000540!6.70e-22!6;CL:0000031!6.70e-22!6;CL:0000404!6.70e-22!6;CL:0000039!3.01e-19!7;CL:0000586!3.01e-19!7;CL:0000047!1.34e-16!8;CL:0000148!1.82e-13!10;CL:0000541!1.82e-13!10;CL:0000147!8.70e-10!14;CL:0000133!3.93e-08!59;CL:0000710!5.23e-07!20;CL:0000221!9.69e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.56e-89;5!CL:0002321;5.01e-30;15!CL:0000540;2.21e-27;6!CL:0000404;2.21e-27;6!CL:0000039;4.48e-24;7!CL:0000586;4.48e-24;7!CL:0000148;6.90e-17;10!CL:0000147;2.95e-12;14!CL:0000710;9.23e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.04e-89,5;CL:0000540,1.93e-27,6;CL:0000031,1.93e-27,6;CL:0000404,1.93e-27,6;CL:0000039,4.14e-24,7;CL:0000586,4.14e-24,7;CL:0000047,8.88e-21,8;CL:0000148,7.69e-17,10;CL:0000541,7.69e-17,10;CL:0000147,3.19e-12,14;CL:0000133,1.79e-10,59;CL:0000710,9.74e-09,20;CL:0000221,1.33e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.21e-27;6!UBERON:0009117;4.47e-17;10!UBERON:0005564;4.47e-17;10 | |||
|ontology_enrichment_disease=DOID:3371!2.75e-15!1;DOID:4549!2.75e-15!1;DOID:5861!2.75e-15!1;DOID:6496!2.75e-15!1;DOID:3095!1.00e-10!22;DOID:2994!1.00e-10!22 | |ontology_enrichment_disease=DOID:3371!2.75e-15!1;DOID:4549!2.75e-15!1;DOID:5861!2.75e-15!1;DOID:6496!2.75e-15!1;DOID:3095!1.00e-10!22;DOID:2994!1.00e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.23e-08;22!DOID:2994;4.23e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.13e-08,22;DOID:2994,4.13e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.31e-17!8;UBERON:0003135!1.75e-12!11;UBERON:0000991!8.60e-07!21;UBERON:0009196!8.60e-07!21;UBERON:0009117!8.60e-07!21;UBERON:0005564!8.60e-07!21 | |ontology_enrichment_uberon=UBERON:0000473!6.31e-17!8;UBERON:0003135!1.75e-12!11;UBERON:0000991!8.60e-07!21;UBERON:0009196!8.60e-07!21;UBERON:0009117!8.60e-07!21;UBERON:0005564!8.60e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.66e-21;8!UBERON:0003135;1.38e-15;11!UBERON:0000922;1.61e-14;49!UBERON:0000991;1.85e-08;21!UBERON:0003101;4.23e-08;22!UBERON:0000079;4.23e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.42e-21,8;UBERON:0003135,1.31e-15,11;UBERON:0000991,1.80e-08,21;UBERON:0009196,1.80e-08,21;UBERON:0009117,1.80e-08,21;UBERON:0005564,1.80e-08,21;UBERON:0004176,4.13e-08,22;UBERON:0003101,4.13e-08,22;UBERON:0000079,4.13e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46460642486856,3.44577397635862,8.36596388660532,5.80501908086074,3.02785021050754,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970817393606503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60753148465019,3.57602535152808,6.64704540846696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874124575709564,0,18.5619670130407,8.55095696849794,5.97316846976492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46460642486856,3.44577397635862,8.36596388660532,5.80501908086074,3.02785021050754,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970817393606503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60753148465019,3.57602535152808,6.64704540846696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874124575709564,0,18.5619670130407,8.55095696849794,5.97316846976492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@TFPI | |short_description=p16@TFPI | ||
}} | }} |
Latest revision as of 00:28, 19 September 2015
Short description: | p16@TFPI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TFPI_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | 0bp_to_ENST00000421427_5end |
EntrezGene: | TFPI |
HGNC: | 11760 |
UniProt: | C9JQ14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.04e-89 | 5 |
neuron | 1.93e-27 | 6 |
neuroblast | 1.93e-27 | 6 |
electrically signaling cell | 1.93e-27 | 6 |
germ line cell | 4.14e-24 | 7 |
germ cell | 4.14e-24 | 7 |
neuronal stem cell | 8.88e-21 | 8 |
melanocyte | 7.69e-17 | 10 |
melanoblast | 7.69e-17 | 10 |
pigment cell | 3.19e-12 | 14 |
neurectodermal cell | 1.79e-10 | 59 |
neurecto-epithelial cell | 9.74e-09 | 20 |
ectodermal cell | 1.33e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 3.42e-21 | 8 |
male reproductive organ | 1.31e-15 | 11 |
gonad | 1.80e-08 | 21 |
indifferent external genitalia | 1.80e-08 | 21 |
indifferent gonad | 1.80e-08 | 21 |
gonad primordium | 1.80e-08 | 21 |
external genitalia | 4.13e-08 | 22 |
male organism | 4.13e-08 | 22 |
male reproductive system | 4.13e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.13e-08 | 22 |
germ cell cancer | 4.13e-08 | 22 |