FFCP PHASE1:Hg19::chr8:39759861..39759881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3620 | |EntrezGene=3620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6059 | |HGNC=6059 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGR8 | |UniProt=E5RGR8 | ||
|association_with_transcript=-8bp_to_ENST00000519154_5end | |association_with_transcript=-8bp_to_ENST00000519154_5end | ||
|cluster_id=chr8:39759861..39759881,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_IDO1_5end | |description=CAGE_peak_3_at_IDO1_5end | ||
|id=chr8:39759861..39759881,+ | |id=chr8:39759861..39759881,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.29e-27!5;CL:0000047!1.81e-23!8;CL:0002605!7.72e-16!3;CL:0000540!1.32e-14!6;CL:0000031!1.32e-14!6;CL:0000404!1.32e-14!6;CL:0002319!3.91e-14!25;CL:0000133!9.08e-12!59;CL:0000221!2.18e-09!71;CL:0000128!4.73e-07!7;CL:0000126!4.73e-07!7;CL:0000127!4.73e-07!7;CL:0002453!4.73e-07!7 | |ontology_enrichment_celltype=CL:0002322!7.29e-27!5;CL:0000047!1.81e-23!8;CL:0002605!7.72e-16!3;CL:0000540!1.32e-14!6;CL:0000031!1.32e-14!6;CL:0000404!1.32e-14!6;CL:0002319!3.91e-14!25;CL:0000133!9.08e-12!59;CL:0000221!2.18e-09!71;CL:0000128!4.73e-07!7;CL:0000126!4.73e-07!7;CL:0000127!4.73e-07!7;CL:0002453!4.73e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.88e-62;5!CL:0000540;9.21e-34;6!CL:0000404;9.21e-34;6!CL:0002321;1.25e-29;15!CL:0000047;2.69e-25;2!CL:0002319;6.24e-22;25!CL:0000148;7.26e-12;10!CL:0000147;1.24e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.88e-62,5;CL:0000047,3.23e-55,8;CL:0000540,1.05e-33,6;CL:0000031,1.05e-33,6;CL:0000404,1.05e-33,6;CL:0000133,3.32e-23,59;CL:0002319,7.09e-22,25;CL:0000221,6.63e-19,72;CL:0000148,7.26e-12,10;CL:0000541,7.26e-12,10;CL:0000147,1.24e-08,14;CL:0000333,3.70e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000031;9.21e-34;6!CL:0000133;1.54e-13;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.05e-07;2!DOID:962;2.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,1.87e-07,2;DOID:962,1.87e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.56e-08,89;UBERON:0003714,1.87e-07,2;UBERON:0001017,9.97e-07,81 | |||
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|short_description=p3@IDO1 | |short_description=p3@IDO1 | ||
}} | }} |
Latest revision as of 05:13, 18 September 2015
Short description: | p3@IDO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IDO1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -8bp_to_ENST00000519154_5end |
EntrezGene: | IDO1 |
HGNC: | 6059 |
UniProt: | E5RGR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.88e-62 | 5 |
neuronal stem cell | 3.23e-55 | 8 |
neuron | 1.05e-33 | 6 |
neuroblast | 1.05e-33 | 6 |
electrically signaling cell | 1.05e-33 | 6 |
neurectodermal cell | 3.32e-23 | 59 |
neural cell | 7.09e-22 | 25 |
ectodermal cell | 6.63e-19 | 72 |
melanocyte | 7.26e-12 | 10 |
melanoblast | 7.26e-12 | 10 |
pigment cell | 1.24e-08 | 14 |
migratory neural crest cell | 3.70e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.56e-08 | 89 |
neural tissue | 1.87e-07 | 2 |
central nervous system | 9.97e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.87e-07 | 2 |
neurofibroma | 1.87e-07 | 2 |