FFCP PHASE1:Hg19::chr8:57353655..57353662,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57353655..57353662,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57353655..57353662,- | |description=CAGE_peak_at_chr8:57353655..57353662,- | ||
|id=chr8:57353655..57353662,- | |id=chr8:57353655..57353662,- | ||
|ontology_enrichment_celltype=CL:0000667!1.04e-19!6;CL:0000058!1.04e-19!6;CL:0000138!1.04e-19!6;CL:0000153!2.37e-13!9;CL:0000447!2.37e-13!9;CL:0002556!3.56e-09!6;CL:0000327!8.83e-09!14;CL:0000499!8.60e-08!27 | |ontology_enrichment_celltype=CL:0000667!1.04e-19!6;CL:0000058!1.04e-19!6;CL:0000138!1.04e-19!6;CL:0000153!2.37e-13!9;CL:0000447!2.37e-13!9;CL:0002556!3.56e-09!6;CL:0000327!8.83e-09!14;CL:0000499!8.60e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0000138;9.07e-18;6!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0000327;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,9.07e-18,6;CL:0000138,9.07e-18,6;CL:0000153,2.45e-12,9;CL:0000447,2.45e-12,9;CL:0000327,5.93e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0003099;9.37e-99;1!UBERON:0003852;9.37e-99;1!UBERON:0005062;5.56e-26;4!UBERON:0007284;5.56e-26;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005383!1.64e-17!3;UBERON:0005382!1.64e-17!3;UBERON:0005705!3.08e-14!1;UBERON:0008193!3.08e-14!1;UBERON:0002514!3.08e-14!1;UBERON:0003462!3.08e-14!1;UBERON:0008001!3.08e-14!1;UBERON:0007914!3.08e-14!1;UBERON:0003457!3.08e-14!1;UBERON:0009292!3.08e-14!1;UBERON:0007375!3.08e-14!1;UBERON:0003323!3.08e-14!1;UBERON:0002397!3.08e-14!1;UBERON:0001709!3.08e-14!1;UBERON:0004066!3.08e-14!1;UBERON:0002244!3.08e-14!1;UBERON:0005620!3.08e-14!1;UBERON:0004068!3.08e-14!1;UBERON:0004362!3.08e-14!1;UBERON:0001874!1.25e-13!1;UBERON:0000369!2.21e-13!4;UBERON:0002435!2.21e-13!4;UBERON:0000204!2.21e-13!4;UBERON:0010082!2.21e-13!4;UBERON:0002308!4.99e-13!9;UBERON:0000125!4.99e-13!9;UBERON:0003129!7.72e-11!11;UBERON:0000075!2.96e-09!13;UBERON:0005944!2.96e-09!13;UBERON:0004288!2.96e-09!13;UBERON:0003089!2.96e-09!13;UBERON:0001758!3.56e-09!6;UBERON:0003672!3.56e-09!6;UBERON:0009663!4.92e-08!7;UBERON:0004089!9.25e-08!2;UBERON:0001873!1.36e-07!2;UBERON:0010122!1.36e-07!2;UBERON:0002148!1.54e-07!2;UBERON:0009662!1.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;9.37e-99;1!UBERON:0008193;9.37e-99;1!UBERON:0010912;9.37e-99;1!UBERON:0002514;9.37e-99;1!UBERON:0003457;9.37e-99;1!UBERON:0008907;9.37e-99;1!UBERON:0008001;9.37e-99;1!UBERON:0007213;9.37e-99;1!UBERON:0009891;9.37e-99;1!UBERON:0007914;9.37e-99;1!UBERON:0007375;9.37e-99;1!UBERON:0003323;9.37e-99;1!UBERON:0010258;9.37e-99;1!UBERON:0005253;9.37e-99;1!UBERON:0007842;9.37e-99;1!UBERON:0002397;9.37e-99;1!UBERON:0003113;9.37e-99;1!UBERON:0003277;9.37e-99;1!UBERON:0001709;9.37e-99;1!UBERON:0002244;9.37e-99;1!UBERON:0005620;9.37e-99;1!UBERON:0010364;9.37e-99;1!UBERON:0004288;9.37e-99;1!UBERON:0004089;2.74e-50;2!UBERON:0001708;5.56e-26;4!UBERON:0008895;5.56e-26;4!UBERON:0011159;4.21e-21;5!UBERON:0003104;1.65e-15;7!UBERON:0009142;1.65e-15;7!UBERON:0010313;2.73e-11;10!UBERON:0011137;2.16e-10;11!UBERON:0010323;2.16e-10;11!UBERON:0000075;1.45e-07;16!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,9.37e-99,1;UBERON:0008193,9.37e-99,1;UBERON:0010912,9.37e-99,1;UBERON:0002514,9.37e-99,1;UBERON:0003457,9.37e-99,1;UBERON:0008907,9.37e-99,1;UBERON:0008001,9.37e-99,1;UBERON:0007213,9.37e-99,1;UBERON:0009891,9.37e-99,1;UBERON:0007914,9.37e-99,1;UBERON:0009292,9.37e-99,1;UBERON:0003099,9.37e-99,1;UBERON:0007375,9.37e-99,1;UBERON:0003323,9.37e-99,1;UBERON:0010258,9.37e-99,1;UBERON:0007842,9.37e-99,1;UBERON:0009494,9.37e-99,1;UBERON:0010042,9.37e-99,1;UBERON:0010045,9.37e-99,1;UBERON:0010259,9.37e-99,1;UBERON:0010359,9.37e-99,1;UBERON:0009526,9.37e-99,1;UBERON:0002397,9.37e-99,1;UBERON:0003113,9.37e-99,1;UBERON:0003277,9.37e-99,1;UBERON:0001709,9.37e-99,1;UBERON:0004066,9.37e-99,1;UBERON:0002244,9.37e-99,1;UBERON:0005620,9.37e-99,1;UBERON:0004362,9.37e-99,1;UBERON:0010364,9.37e-99,1;UBERON:0010046,9.37e-99,1;UBERON:0005868,9.37e-99,1;UBERON:0007238,9.37e-99,1;UBERON:0004288,9.37e-99,1;UBERON:0004068,9.37e-99,1;UBERON:0010334,9.37e-99,1;UBERON:0003852,9.37e-99,1;UBERON:0010253,9.37e-99,1;UBERON:0005253,2.74e-50,2;UBERON:0004089,2.74e-50,2;UBERON:0001708,5.56e-26,4;UBERON:0008895,5.56e-26,4;UBERON:0011159,4.21e-21,5;UBERON:0010188,7.67e-18,6;UBERON:0002539,7.67e-18,6;UBERON:0008816,7.67e-18,6;UBERON:0010313,2.73e-11,10;UBERON:0002342,2.73e-11,10;UBERON:0005062,2.73e-11,10;UBERON:0010323,2.16e-10,11;UBERON:0011137,1.86e-08,14;UBERON:0000075,1.45e-07,16;UBERON:0008814,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.44846518960824,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,7.40619481750436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.44846518960824,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,7.40619481750436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:57353655..57353662,- | |short_description=p@chr8:57353655..57353662,- | ||
}} | }} |
Latest revision as of 19:01, 31 July 2015
Short description: | p@chr8:57353655..57353662, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57353655..57353662, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 9.07e-18 | 6 |
chondrocyte | 9.07e-18 | 6 |
GAG secreting cell | 2.45e-12 | 9 |
carbohydrate secreting cell | 2.45e-12 | 9 |
extracellular matrix secreting cell | 5.93e-08 | 15 |