FFCP PHASE1:Hg19::chr8:65289478..65289487,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100130155 | |EntrezGene=100130155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-396bp_to_ENST00000524060,NR_034103_5end | |association_with_transcript=-396bp_to_ENST00000524060,NR_034103_5end | ||
|cluster_id=chr8:65289478..65289487,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_5_at_LOC100130155_5end | |description=CAGE_peak_5_at_LOC100130155_5end | ||
|id=chr8:65289478..65289487,+ | |id=chr8:65289478..65289487,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.53e-09;3!UBERON:0003056;1.53e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.04e-62!69;UBERON:0006238!2.04e-62!69;UBERON:0002780!9.31e-62!41;UBERON:0001890!9.31e-62!41;UBERON:0006240!9.31e-62!41;UBERON:0001049!1.16e-61!57;UBERON:0005068!1.16e-61!57;UBERON:0006241!1.16e-61!57;UBERON:0007135!1.16e-61!57;UBERON:0003080!3.25e-60!42;UBERON:0002616!1.97e-59!59;UBERON:0001893!3.79e-55!34;UBERON:0002619!1.34e-53!22;UBERON:0005743!3.47e-53!86;UBERON:0001869!1.03e-52!32;UBERON:0001017!6.69e-52!82;UBERON:0001950!1.72e-51!20;UBERON:0002791!5.87e-51!33;UBERON:0002020!2.03e-49!34;UBERON:0003528!2.03e-49!34;UBERON:0000073!9.99e-48!94;UBERON:0001016!9.99e-48!94;UBERON:0000956!4.69e-47!25;UBERON:0000203!4.69e-47!25;UBERON:0003056!1.74e-44!61;UBERON:0003075!7.40e-43!86;UBERON:0007284!7.40e-43!86;UBERON:0002346!9.77e-41!90;UBERON:0007023!2.02e-39!115;UBERON:0000033!1.73e-38!123;UBERON:0000153!1.85e-36!129;UBERON:0007811!1.85e-36!129;UBERON:0004121!2.05e-24!169;UBERON:0000200!7.63e-24!6;UBERON:0000924!9.96e-24!173;UBERON:0006601!9.96e-24!173;UBERON:0001872!2.78e-19!5;UBERON:0001871!4.59e-18!7;UBERON:0002771!7.13e-18!3;UBERON:0000025!4.99e-16!194;UBERON:0001905!2.29e-13!2;UBERON:0002757!2.29e-13!2;UBERON:0010134!2.29e-13!2;UBERON:0002784!2.29e-13!2;UBERON:0005408!2.29e-13!2;UBERON:0001899!2.29e-13!2;UBERON:0004111!7.58e-12!241;UBERON:0002021!5.36e-11!5;UBERON:0000349!8.64e-11!5;UBERON:0000477!4.24e-10!286;UBERON:0000475!4.33e-10!365;UBERON:0000064!4.76e-10!219;UBERON:0000483!5.78e-09!309;UBERON:0000119!7.99e-09!312;UBERON:0000988!2.28e-08!3;UBERON:0001894!3.64e-08!7;UBERON:0006222!3.64e-08!7;UBERON:0004733!1.04e-07!12;UBERON:0002028!1.04e-07!12;UBERON:0007277!1.04e-07!12;UBERON:0002902!2.52e-07!1;UBERON:0009899!2.52e-07!1;UBERON:0002581!2.67e-07!1;UBERON:0002022!3.01e-07!1;UBERON:0004732!4.01e-07!13;UBERON:0003296!4.31e-07!4;UBERON:0010133!4.31e-07!4;UBERON:0003112!4.85e-07!1;UBERON:0000032!4.85e-07!1;UBERON:0005253!4.85e-07!1;UBERON:0003128!4.85e-07!1;UBERON:0002241!4.85e-07!1;UBERON:0001703!4.85e-07!1;UBERON:0004761!4.85e-07!1;UBERON:0009617!4.85e-07!1;UBERON:0001882!5.14e-07!1;UBERON:0005403!5.14e-07!1;UBERON:0007190!6.49e-07!1;UBERON:0001874!7.29e-07!1;UBERON:0002336!9.73e-07!1;UBERON:0001018!9.73e-07!1;UBERON:0002473!9.73e-07!1;UBERON:0005340!9.73e-07!1;UBERON:0002316!9.73e-07!1;UBERON:0003544!9.73e-07!1;UBERON:0001020!9.73e-07!1;UBERON:0005970!9.73e-07!1;UBERON:0002437!9.73e-07!1;UBERON:0002298!9.99e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.46e-50;2!UBERON:0002757;1.46e-50;2!UBERON:0010134;1.46e-50;2!UBERON:0005408;1.46e-50;2!UBERON:0001899;1.46e-50;2!UBERON:0003296;6.73e-26;4!UBERON:0010133;6.73e-26;4!UBERON:0002784;6.73e-26;4!UBERON:0001894;2.85e-15;7!UBERON:0002780;8.09e-08;41!UBERON:0001890;8.09e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.46e-50,2;UBERON:0002757,1.46e-50,2;UBERON:0010134,1.46e-50,2;UBERON:0005408,1.46e-50,2;UBERON:0001899,1.46e-50,2;UBERON:0003296,6.73e-26,4;UBERON:0010133,6.73e-26,4;UBERON:0002784,6.73e-26,4;UBERON:0001894,2.85e-15,7;UBERON:0006222,2.85e-15,7;UBERON:0000073,1.06e-11,53;UBERON:0002616,1.06e-11,53;UBERON:0001049,4.24e-11,56;UBERON:0005068,4.24e-11,56;UBERON:0006241,4.24e-11,56;UBERON:0007135,4.24e-11,56;UBERON:0003075,7.67e-11,82;UBERON:0007284,7.67e-11,82;UBERON:0002346,2.40e-10,86;UBERON:0003056,3.13e-10,61;UBERON:0002780,7.23e-10,41;UBERON:0001890,7.23e-10,41;UBERON:0003080,7.23e-10,41;UBERON:0006240,7.23e-10,41;UBERON:0000955,4.45e-09,68;UBERON:0006238,4.45e-09,68;UBERON:0010371,1.40e-08,104;UBERON:0007023,6.65e-08,114;UBERON:0001017,1.11e-07,81;UBERON:0001016,6.05e-07,89;UBERON:0010314,9.02e-07,132 | |||
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|short_description=p5@LOC100130155 | |short_description=p5@LOC100130155 | ||
}} | }} |
Latest revision as of 19:05, 18 September 2015
Short description: | p5@LOC100130155 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LOC100130155_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -396bp_to_ENST00000524060, NR_034103_5end |
EntrezGene: | LOC100130155 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.46e-50 | 2 |
regional part of epithalamus | 1.46e-50 | 2 |
secretory circumventricular organ | 1.46e-50 | 2 |
circumventricular organ | 1.46e-50 | 2 |
epithalamus | 1.46e-50 | 2 |
gland of diencephalon | 6.73e-26 | 4 |
neuroendocrine gland | 6.73e-26 | 4 |
regional part of diencephalon | 6.73e-26 | 4 |
diencephalon | 2.85e-15 | 7 |
future diencephalon | 2.85e-15 | 7 |
regional part of nervous system | 1.06e-11 | 53 |
regional part of brain | 1.06e-11 | 53 |
neural tube | 4.24e-11 | 56 |
neural rod | 4.24e-11 | 56 |
future spinal cord | 4.24e-11 | 56 |
neural keel | 4.24e-11 | 56 |
neural plate | 7.67e-11 | 82 |
presumptive neural plate | 7.67e-11 | 82 |
neurectoderm | 2.40e-10 | 86 |
pre-chordal neural plate | 3.13e-10 | 61 |
regional part of forebrain | 7.23e-10 | 41 |
forebrain | 7.23e-10 | 41 |
anterior neural tube | 7.23e-10 | 41 |
future forebrain | 7.23e-10 | 41 |
brain | 4.45e-09 | 68 |
future brain | 4.45e-09 | 68 |
ecto-epithelium | 1.40e-08 | 104 |
adult organism | 6.65e-08 | 114 |
central nervous system | 1.11e-07 | 81 |
nervous system | 6.05e-07 | 89 |
structure with developmental contribution from neural crest | 9.02e-07 | 132 |