FFCP PHASE1:Hg19::chr8:65492915..65492932,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27319 | |EntrezGene=27319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11963 | |HGNC=11963 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFJ8 | |UniProt=Q8NFJ8 | ||
|association_with_transcript=101bp_to_ENST00000321870,uc003xvi.2_5end | |association_with_transcript=101bp_to_ENST00000321870,uc003xvi.2_5end | ||
|cluster_id=chr8:65492915..65492932,+ | |||
|coexpression_cluster_id=C1804 | |||
|description=CAGE_peak_1_at_BHLHE22_5end | |description=CAGE_peak_1_at_BHLHE22_5end | ||
|id=chr8:65492915..65492932,+ | |id=chr8:65492915..65492932,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.62e-10;3!UBERON:0006601;1.28e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.13e-49!115;UBERON:0000073!2.11e-39!94;UBERON:0001016!2.11e-39!94;UBERON:0001017!1.15e-37!82;UBERON:0005743!9.12e-37!86;UBERON:0001049!7.90e-34!57;UBERON:0005068!7.90e-34!57;UBERON:0006241!7.90e-34!57;UBERON:0007135!7.90e-34!57;UBERON:0000955!1.37e-29!69;UBERON:0006238!1.37e-29!69;UBERON:0002616!1.16e-28!59;UBERON:0002346!8.49e-27!90;UBERON:0002619!5.49e-25!22;UBERON:0003075!1.30e-24!86;UBERON:0007284!1.30e-24!86;UBERON:0002780!2.88e-24!41;UBERON:0001890!2.88e-24!41;UBERON:0006240!2.88e-24!41;UBERON:0003080!1.88e-23!42;UBERON:0002020!3.32e-22!34;UBERON:0003528!3.32e-22!34;UBERON:0001950!3.59e-22!20;UBERON:0001893!5.74e-22!34;UBERON:0001869!7.04e-22!32;UBERON:0000956!3.23e-21!25;UBERON:0000203!3.23e-21!25;UBERON:0002791!6.10e-21!33;UBERON:0000924!1.06e-20!173;UBERON:0006601!1.06e-20!173;UBERON:0004121!6.01e-19!169;UBERON:0003056!1.44e-16!61;UBERON:0000153!7.23e-16!129;UBERON:0007811!7.23e-16!129;UBERON:0000033!4.10e-15!123;UBERON:0004732!1.48e-11!13;UBERON:0003076!1.70e-11!15;UBERON:0003057!1.70e-11!15;UBERON:0004733!1.78e-10!12;UBERON:0002028!1.78e-10!12;UBERON:0007277!1.78e-10!12;UBERON:0001871!7.11e-09!7;UBERON:0000200!2.05e-08!6;UBERON:0002021!3.28e-08!5;UBERON:0000349!4.57e-08!5;UBERON:0002680!2.51e-07!9;UBERON:0001895!2.51e-07!9;UBERON:0010092!2.51e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.76e-43;22!UBERON:0000956;3.36e-37;25!UBERON:0000203;3.36e-37;25!UBERON:0001950;5.59e-37;20!UBERON:0001869;1.06e-27;32!UBERON:0003528;1.89e-26;34!UBERON:0002020;1.89e-26;34!UBERON:0002791;1.07e-24;32!UBERON:0001893;2.01e-24;34!UBERON:0000073;4.04e-19;53!UBERON:0002616;4.04e-19;53!UBERON:0002780;5.91e-17;41!UBERON:0001890;5.91e-17;41!UBERON:0000200;6.57e-16;6!UBERON:0002021;2.09e-15;5!UBERON:0000955;4.71e-15;68!UBERON:0001871;5.60e-15;6!UBERON:0001017;5.75e-15;75!UBERON:0001016;1.99e-14;83!UBERON:0004732;2.03e-13;13!UBERON:0004733;2.06e-11;12!UBERON:0002028;2.06e-11;12!UBERON:0000349;8.88e-11;5!UBERON:0002680;1.65e-08;9!UBERON:0001895;1.65e-08;9!UBERON:0002298;9.81e-08;6!UBERON:0001954;1.03e-07;2!UBERON:0003022;1.03e-07;2!UBERON:0002421;1.03e-07;2!UBERON:0002600;1.03e-07;2!UBERON:0001876;1.91e-07;2!UBERON:0003714;4.59e-07;2!UBERON:0002148;8.11e-07;2!UBERON:0006331;8.11e-07;2!UBERON:0009662;8.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.35e-43,22;UBERON:0001016,1.43e-42,89;UBERON:0001017,3.63e-38,81;UBERON:0000956,1.65e-37,25;UBERON:0000203,1.65e-37,25;UBERON:0001950,2.52e-37,20;UBERON:0001049,5.67e-34,56;UBERON:0005068,5.67e-34,56;UBERON:0006241,5.67e-34,56;UBERON:0007135,5.67e-34,56;UBERON:0000073,1.17e-33,53;UBERON:0002616,1.17e-33,53;UBERON:0003528,9.38e-33,34;UBERON:0002020,9.38e-33,34;UBERON:0001869,1.72e-31,32;UBERON:0000955,5.12e-31,68;UBERON:0006238,5.12e-31,68;UBERON:0001893,2.23e-29,34;UBERON:0002791,1.92e-28,32;UBERON:0002346,6.54e-25,86;UBERON:0003075,1.80e-24,82;UBERON:0007284,1.80e-24,82;UBERON:0002780,1.42e-23,41;UBERON:0001890,1.42e-23,41;UBERON:0003080,1.42e-23,41;UBERON:0006240,1.42e-23,41;UBERON:0004121,1.01e-22,171;UBERON:0000924,1.01e-22,171;UBERON:0006601,1.01e-22,171;UBERON:0010371,8.49e-21,104;UBERON:0003056,1.33e-17,61;UBERON:0007023,7.68e-17,114;UBERON:0011216,1.28e-16,223;UBERON:0000200,6.23e-16,6;UBERON:0002021,1.67e-15,5;UBERON:0001871,3.40e-15,6;UBERON:0004732,1.64e-13,13;UBERON:0010314,1.85e-13,132;UBERON:0004733,1.61e-11,12;UBERON:0002028,1.61e-11,12;UBERON:0007277,1.61e-11,12;UBERON:0003076,1.68e-11,15;UBERON:0003057,1.68e-11,15;UBERON:0000349,8.37e-11,5;UBERON:0002680,1.65e-08,9;UBERON:0001895,1.65e-08,9;UBERON:0010092,1.65e-08,9;UBERON:0002298,7.51e-08,6;UBERON:0001954,1.05e-07,2;UBERON:0003022,1.05e-07,2;UBERON:0002421,1.05e-07,2;UBERON:0002600,1.05e-07,2;UBERON:0001876,1.74e-07,2;UBERON:0003714,4.95e-07,2;UBERON:0002148,8.24e-07,2;UBERON:0006331,8.24e-07,2;UBERON:0009662,8.24e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,7.48851376329922,8.21005894499458,6.21815172378066,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0.918251677112708,0.962787081228281,0,0,0,0,1.45104619314292,1.70215567407342,0.622822248995575,0,0,0,2.42159801053347,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,2.60279707715243,17.0123538811093,11.8936548387388,16.5864075429822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,2.01799707191048,0,0,4.91585222893533,2.46043718681657,3.50383197595008,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,3.97659059106519,24.8984867046608,0,0,0.211125408127993,0.398495976502139,0.552567831062295,0,0,3.81562896929315,0,0,0,0,0.295930216910801,0,0,3.87733098438087,2.59750674853184,21.9575177801314,0,0,0,0,0,0,1.72371686620732,0.291604613383254,0,0,0.723578631752448,9.15490417902499,12.9377734119533,18.0284047561664,5.92340572315726,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,3.49044531990328,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.417687798021821,0.943615861729479,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,0,37.0348041572893,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,1.58186518546373,0,0,0.696418755514666,0,0,0.213452994739353,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,25.4473500738977,14.7099678600502,0,0.137539436597234,0,0,0,2.61223093629506,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,4.52490347265427,1.45455861916959,0,0,1.06787412567695,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,1.77213635993397,1.34228891392159,1.001527445652,1.72022758707021,1.88579387612649,0.620964029413834,0.276697269872462,0,0,0,0,0,37.8243884674254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,2.17420431216208,1.72519698234691,0.314531883711793,0,0.678930119816101,12.3293453658976,0.743614585554013,23.4630865548762,0,0,0,0,0,0.449604575675217,4.25089728976755,5.9064527851146,2.66651273512982,13.1077282035293,2.76629009856872,3.55246420390072,1.42769420259154,0,0,0,0,0,2.7614397042404,0,0.0752103283492573,0,0,0,0,0,1.08060135389431,0,3.51367554052013,0.887821342714695,14.7683198434919,0,0.496211178389294,0,0,0,0.672567444437648,0.606965604236632,0.227662191351298,0.177404740325278,0.921871900446234,0,0.543757863814654,1.77586488619693,0,0,0.39246546425257,0.314231179832004,0,0,0,0,2.07281978112303,0.47404083519818,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,2.4285549652957,6.08242605001475,0,0,0,1.64910775118144,0,0.231522474323834,0,0,0.245148321753905,0,0.981542335574726,0,1.2679671827502,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,1.90376172534561,53.6711349118664,1.5870805215462,0,0,0,0,0.327796715891087,0,0,0,0.0918948995348449,0,0.606229585745915,0,0,0.20686599172379,0.426467963801962,0,0.129177819672012,0.124149428591716,0,0.25458863311266,0,0,0,0.202056159043763,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,7.48851376329922,8.21005894499458,6.21815172378066,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0.918251677112708,0.962787081228281,0,0,0,0,1.45104619314292,1.70215567407342,0.622822248995575,0,0,0,2.42159801053347,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,2.60279707715243,17.0123538811093,11.8936548387388,16.5864075429822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,2.01799707191048,0,0,4.91585222893533,2.46043718681657,3.50383197595008,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,3.97659059106519,24.8984867046608,0,0,0.211125408127993,0.398495976502139,0.552567831062295,0,0,3.81562896929315,0,0,0,0,0.295930216910801,0,0,3.87733098438087,2.59750674853184,21.9575177801314,0,0,0,0,0,0,1.72371686620732,0.291604613383254,0,0,0.723578631752448,9.15490417902499,12.9377734119533,18.0284047561664,5.92340572315726,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,3.49044531990328,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.417687798021821,0.943615861729479,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,0,37.0348041572893,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,1.58186518546373,0,0,0.696418755514666,0,0,0.213452994739353,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,25.4473500738977,14.7099678600502,0,0.137539436597234,0,0,0,2.61223093629506,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,4.52490347265427,1.45455861916959,0,0,1.06787412567695,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,1.77213635993397,1.34228891392159,1.001527445652,1.72022758707021,1.88579387612649,0.620964029413834,0.276697269872462,0,0,0,0,0,37.8243884674254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,2.17420431216208,1.72519698234691,0.314531883711793,0,0.678930119816101,12.3293453658976,0.743614585554013,23.4630865548762,0,0,0,0,0,0.449604575675217,4.25089728976755,5.9064527851146,2.66651273512982,13.1077282035293,2.76629009856872,3.55246420390072,1.42769420259154,0,0,0,0,0,2.7614397042404,0,0.0752103283492573,0,0,0,0,0,1.08060135389431,0,3.51367554052013,0.887821342714695,14.7683198434919,0,0.496211178389294,0,0,0,0.672567444437648,0.606965604236632,0.227662191351298,0.177404740325278,0.921871900446234,0,0.543757863814654,1.77586488619693,0,0,0.39246546425257,0.314231179832004,0,0,0,0,2.07281978112303,0.47404083519818,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,2.4285549652957,6.08242605001475,0,0,0,1.64910775118144,0,0.231522474323834,0,0,0.245148321753905,0,0.981542335574726,0,1.2679671827502,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,1.90376172534561,53.6711349118664,1.5870805215462,0,0,0,0,0.327796715891087,0,0,0,0.0918948995348449,0,0.606229585745915,0,0,0.20686599172379,0.426467963801962,0,0.129177819672012,0.124149428591716,0,0.25458863311266,0,0,0,0.202056159043763,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0.603821380773079,0 | ||
|short_description=p1@BHLHE22 | |short_description=p1@BHLHE22 | ||
}} | }} |
Latest revision as of 19:25, 18 September 2015
Short description: | p1@BHLHE22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BHLHE22_5end |
Coexpression cluster: | C1804_hippocampus_temporal_duodenum_amygdala_brain_merkel_Neurons |
Association with transcript: | 101bp_to_ENST00000321870, uc003xvi.2_5end |
EntrezGene: | BHLHE22 |
HGNC: | 11963 |
UniProt: | Q8NFJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data