FFCP PHASE1:Hg19::chr14:50549924..50549935,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:50549924..50549935,-
|short_description=p@chr14:50549924..50549935,-
|description=CAGE_peak_at_chr14:50549924..50549935,-
|association_with_transcript=NA
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:50549924..50549935,- | |||
|description=CAGE_peak_at_chr14:50549924..50549935,- | |||
|id=chr14:50549924..50549935,- | |||
|ontology_enrichment_celltype=CL:0000838!3.34e-43!52;CL:0000542!3.29e-42!53;CL:0000051!3.29e-42!53;CL:0000738!3.84e-30!140;CL:0002087!3.15e-29!119;CL:0002031!5.56e-26!124;CL:0000037!2.02e-23!172;CL:0000566!2.02e-23!172;CL:0000084!1.10e-22!25;CL:0000827!1.10e-22!25;CL:0000988!1.52e-22!182;CL:0000791!6.00e-22!18;CL:0000789!6.00e-22!18;CL:0002420!6.00e-22!18;CL:0002419!6.00e-22!18;CL:0000790!6.00e-22!18;CL:0002032!3.91e-21!165;CL:0000837!3.91e-21!165;CL:0000624!3.68e-16!6;CL:0000945!5.07e-16!24;CL:0000826!5.07e-16!24;CL:0000898!3.23e-09!3;CL:0000623!3.63e-08!3;CL:0000825!3.63e-08!3;CL:0000625!7.14e-08!11;CL:0000453!7.98e-08!5;CL:0000815!7.85e-07!2;CL:0000792!7.85e-07!2;CL:0002677!7.85e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.08e-26;6!CL:0000815;7.76e-21;2!CL:0000792;7.76e-21;2!CL:0002677;7.76e-21;2!CL:0000945;8.01e-20;24!CL:0000898;3.16e-14;3!CL:0000542;2.07e-12;53!CL:0000946;2.67e-11;1!CL:0000786;2.67e-11;1!CL:0002087;2.89e-11;104!CL:0000791;4.57e-09;18!CL:0000789;4.57e-09;18!CL:0002419;4.57e-09;18!CL:0000236;1.92e-07;13!CL:0000860;3.65e-07;33!CL:0002057;3.65e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.63e-26,6;CL:0000838,1.28e-25,52;CL:0000542,4.19e-25,53;CL:0000051,4.19e-25,53;CL:0002087,2.15e-22,115;CL:0002031,2.29e-21,120;CL:0000815,5.20e-21,2;CL:0000792,5.20e-21,2;CL:0002677,5.20e-21,2;CL:0000945,8.77e-20,24;CL:0000826,8.77e-20,24;CL:0000738,1.39e-18,136;CL:0002032,2.52e-15,161;CL:0000837,2.52e-15,161;CL:0000037,1.38e-14,168;CL:0000898,2.42e-14,3;CL:0000988,1.02e-13,177;CL:0000946,1.31e-11,1;CL:0000786,1.31e-11,1;CL:0000980,1.31e-11,1;CL:0000236,1.38e-11,14;CL:0000791,5.20e-09,18;CL:0000789,5.20e-09,18;CL:0002420,5.20e-09,18;CL:0002419,5.20e-09,18;CL:0000790,5.20e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000051;2.07e-12;53!CL:0000790;4.57e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.71e-08!7;UBERON:0002390!4.43e-07!102;UBERON:0003061!4.43e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,2.13461532569859,1.25937250101887,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,2.41321976515633,1.29096936716765,0,0,0,0,1.53041946185451,1.60464513538047,1.91801137739712,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0,0,1.32208974556972,0,1.1384259382189,0,0,0,0,0,0.196709770113833,1.17903228824749,1.02800749499755,0.501559486172034,1.30368906653436,0.473447805734733,0,0.668462741311041,1.47302953737419,0.221533894583621,0.812411591295047,0.384273959177026,0.650296737799391,0.164437904603676,0,1.44901542867526,0.741432815810302,0.535081656179426,0,0.339928028092699,0.766440987203842,1.37450978193052,0.759059076058509,0.95569624297229,0,0,0,0.383959833463255,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0.215627574859517,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0.102268682502155,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.988058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0.79994958341972,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,2.13461532569859,1.25937250101887,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,2.41321976515633,1.29096936716765,0,0,0,0,1.53041946185451,1.60464513538047,1.91801137739712,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0,0,1.32208974556972,0,1.1384259382189,0,0,0,0,0,0.196709770113833,1.17903228824749,1.02800749499755,0.501559486172034,1.30368906653436,0.473447805734733,0,0.668462741311041,1.47302953737419,0.221533894583621,0.812411591295047,0.384273959177026,0.650296737799391,0.164437904603676,0,1.44901542867526,0.741432815810302,0.535081656179426,0,0.339928028092699,0.766440987203842,1.37450978193052,0.759059076058509,0.95569624297229,0,0,0,0.383959833463255,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0.215627574859517,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0.102268682502155,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.988058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0.79994958341972,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p@chr14:50549924..50549935,- | |||
}} | }} |
Latest revision as of 20:53, 24 July 2015
Short description: | p@chr14:50549924..50549935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:50549924..50549935, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.63e-26 | 6 |
lymphoid lineage restricted progenitor cell | 1.28e-25 | 52 |
lymphocyte | 4.19e-25 | 53 |
common lymphoid progenitor | 4.19e-25 | 53 |
nongranular leukocyte | 2.15e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.29e-21 | 120 |
regulatory T cell | 5.20e-21 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.20e-21 | 2 |
naive regulatory T cell | 5.20e-21 | 2 |
lymphocyte of B lineage | 8.77e-20 | 24 |
pro-B cell | 8.77e-20 | 24 |
leukocyte | 1.39e-18 | 136 |
hematopoietic oligopotent progenitor cell | 2.52e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-15 | 161 |
hematopoietic stem cell | 1.38e-14 | 168 |
naive T cell | 2.42e-14 | 3 |
hematopoietic cell | 1.02e-13 | 177 |
antibody secreting cell | 1.31e-11 | 1 |
plasma cell | 1.31e-11 | 1 |
plasmablast | 1.31e-11 | 1 |
B cell | 1.38e-11 | 14 |
mature alpha-beta T cell | 5.20e-09 | 18 |
alpha-beta T cell | 5.20e-09 | 18 |
immature T cell | 5.20e-09 | 18 |
mature T cell | 5.20e-09 | 18 |
immature alpha-beta T cell | 5.20e-09 | 18 |