FFCP PHASE1:Hg19::chr2:242004292..242004308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25992 | |EntrezGene=25992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24696 | |HGNC=24696 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-406bp_to_uc002wak.2_5end | |association_with_transcript=-406bp_to_uc002wak.2_5end | ||
|cluster_id=chr2:242004292..242004308,+ | |||
|coexpression_cluster_id=C1156 | |||
|description=CAGE_peak_15_at_SNED1_5end | |description=CAGE_peak_15_at_SNED1_5end | ||
|id=chr2:242004292..242004308,+ | |id=chr2:242004292..242004308,+ | ||
|ontology_enrichment_celltype=CL:0002564!5.50e-09!3 | |ontology_enrichment_celltype=CL:0002564!5.50e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002564;6.18e-41;3!CL:0002602;1.14e-27;2!CL:0000135;1.48e-18;3!CL:0000214;1.48e-18;3!CL:0000388;1.48e-18;3!CL:0002581;1.50e-14;1!CL:0002262;6.35e-08;2!CL:1000398;6.35e-08;2!CL:0002575;6.35e-08;2!CL:0002598;6.35e-08;2!CL:0000499;8.27e-08;28!CL:0000153;8.58e-07;9!CL:0000447;8.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,6.64e-41,3;CL:0002602,5.41e-28,2;CL:0000214,1.48e-18,3;CL:0000135,1.77e-18,3;CL:0000388,1.77e-18,3;CL:0002581,1.07e-14,1;CL:0002598,4.69e-08,2;CL:0002262,5.74e-08,2;CL:1000398,5.74e-08,2;CL:0000499,8.58e-08,28;CL:0002575,9.19e-08,2;CL:0000153,8.59e-07,9;CL:0000447,8.59e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!4.99e-09!5;UBERON:0000982!4.99e-09!5;UBERON:0004770!4.99e-09!5;UBERON:0002242!5.50e-09!3;UBERON:0003068!5.50e-09!3;UBERON:0002328!5.50e-09!3;UBERON:0004880!5.50e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.02e-80;8!UBERON:0000982;1.02e-80;8!UBERON:0004770;1.02e-80;8!UBERON:0011135;9.37e-67;5!UBERON:0002216;9.37e-67;5!UBERON:0011134;9.37e-67;5!UBERON:0002209;9.37e-67;5!UBERON:0002213;9.37e-67;5!UBERON:0007844;9.37e-67;5!UBERON:0011138;9.37e-67;5!UBERON:0001130;9.37e-67;5!UBERON:0001066;9.37e-67;5!UBERON:0001468;9.37e-67;5!UBERON:0002242;6.18e-41;3!UBERON:0006444;1.14e-27;2!UBERON:0001995;1.14e-27;2!UBERON:0004715;1.14e-27;2!UBERON:0000075;5.63e-21;16!UBERON:0002418;8.29e-19;3!UBERON:0004755;8.29e-19;3!UBERON:0007846;1.48e-18;3!UBERON:0006915;1.48e-18;3!UBERON:0007616;1.48e-18;3!UBERON:0000043;1.48e-18;3!UBERON:0007845;1.48e-18;3!UBERON:0002217;1.48e-18;3!UBERON:0002018;1.48e-18;3!UBERON:0004765;6.44e-13;26!UBERON:0001434;2.20e-11;36!UBERON:0002204;2.11e-08;70!UBERON:0001281;6.35e-08;2!UBERON:0003497;6.35e-08;2!UBERON:0003909;6.35e-08;2!UBERON:0003835;6.35e-08;2!UBERON:0005406;6.35e-08;2!UBERON:0004457;8.58e-07;9!UBERON:0000042;8.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,5.70e-81,8;UBERON:0000982,5.70e-81,8;UBERON:0004770,5.70e-81,8;UBERON:0011135,4.80e-67,5;UBERON:0002216,4.80e-67,5;UBERON:0011134,4.80e-67,5;UBERON:0002209,4.80e-67,5;UBERON:0002213,4.80e-67,5;UBERON:0005856,4.80e-67,5;UBERON:0005866,4.80e-67,5;UBERON:0005863,4.80e-67,5;UBERON:0007844,4.80e-67,5;UBERON:0011138,4.80e-67,5;UBERON:0001130,4.80e-67,5;UBERON:0001066,4.80e-67,5;UBERON:0001468,4.80e-67,5;UBERON:0002242,6.64e-41,3;UBERON:0003068,6.64e-41,3;UBERON:0002328,6.64e-41,3;UBERON:0004880,6.64e-41,3;UBERON:0006444,5.41e-28,2;UBERON:0001995,5.41e-28,2;UBERON:0004715,5.41e-28,2;UBERON:0000075,4.58e-21,16;UBERON:0002418,5.06e-19,3;UBERON:0004755,5.06e-19,3;UBERON:0006915,1.48e-18,3;UBERON:0007616,1.48e-18,3;UBERON:0002217,1.48e-18,3;UBERON:0002018,1.48e-18,3;UBERON:0007846,1.77e-18,3;UBERON:0000043,1.77e-18,3;UBERON:0007845,1.77e-18,3;UBERON:0011137,2.83e-09,14;UBERON:0005406,5.37e-08,2;UBERON:0001281,5.74e-08,2;UBERON:0003497,5.74e-08,2;UBERON:0003909,5.74e-08,2;UBERON:0003835,5.74e-08,2;UBERON:0002204,8.55e-07,167 | |||
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| ||
|short_description=p15@SNED1 | |short_description=p15@SNED1 | ||
}} | }} |
Latest revision as of 09:29, 16 September 2015
Short description: | p15@SNED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SNED1_5end |
Coexpression cluster: | C1156_Nucleus_Anulus_Mesenchymal_tenocyte_Pericytes_mesenchymal_Synoviocyte |
Association with transcript: | -406bp_to_uc002wak.2_5end |
EntrezGene: | SNED1 |
HGNC: | 24696 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 6.64e-41 | 3 |
annulus pulposus cell | 5.41e-28 | 2 |
synovial cell | 1.48e-18 | 3 |
fibrocyte | 1.77e-18 | 3 |
tendon cell | 1.77e-18 | 3 |
perirenal preadipocyte | 1.07e-14 | 1 |
bronchial smooth muscle cell | 4.69e-08 | 2 |
endothelial cell of sinusoid | 5.74e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.74e-08 | 2 |
stromal cell | 8.58e-08 | 28 |
central nervous system pericyte | 9.19e-08 | 2 |
GAG secreting cell | 8.59e-07 | 9 |
carbohydrate secreting cell | 8.59e-07 | 9 |