FFCP PHASE1:Hg19::chr2:242350337..242350369,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9855 | |EntrezGene=9855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16460 | |HGNC=16460 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471447,ENST00000485051_5end | |association_with_transcript=0bp_to_ENST00000471447,ENST00000485051_5end | ||
|cluster_id=chr2:242350337..242350369,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_3_at_FARP2_5end | |description=CAGE_peak_3_at_FARP2_5end | ||
|id=chr2:242350337..242350369,+ | |id=chr2:242350337..242350369,+ | ||
|ontology_enrichment_celltype=CL:0000148!4.09e-12!10;CL:0000541!4.09e-12!10;CL:0002567!1.11e-08!3;CL:0000147!2.97e-08!14 | |ontology_enrichment_celltype=CL:0000148!4.09e-12!10;CL:0000541!4.09e-12!10;CL:0002567!1.11e-08!3;CL:0000147!2.97e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.11e-52;10!CL:0000147;5.77e-37;14!CL:0002567;4.57e-33;3!CL:0000710;1.03e-25;20!CL:0000075;6.81e-19;27!CL:0002573;9.29e-15;2!CL:0002077;3.25e-13;34!CL:0002566;3.27e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.11e-52,10;CL:0000541,6.11e-52,10;CL:0000147,5.77e-37,14;CL:0002567,4.82e-33,3;CL:0000710,1.03e-25,20;CL:0000333,5.82e-19,41;CL:0000075,6.81e-19,27;CL:0002077,7.15e-15,34;CL:0002573,7.53e-15,2;CL:0000133,4.98e-13,59;CL:0002566,3.27e-12,1;CL:0000221,1.56e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;4.56e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.92e-22;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.93e-22,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.84e-37!57;UBERON:0005068!2.84e-37!57;UBERON:0006241!2.84e-37!57;UBERON:0007135!2.84e-37!57;UBERON:0002616!5.16e-33!59;UBERON:0000955!2.23e-32!69;UBERON:0006238!2.23e-32!69;UBERON:0005743!2.80e-31!86;UBERON:0001017!2.90e-31!82;UBERON:0000073!6.09e-31!94;UBERON:0001016!6.09e-31!94;UBERON:0002780!6.43e-31!41;UBERON:0001890!6.43e-31!41;UBERON:0006240!6.43e-31!41;UBERON:0003080!5.18e-30!42;UBERON:0002020!7.27e-27!34;UBERON:0003528!7.27e-27!34;UBERON:0001893!9.02e-27!34;UBERON:0002791!3.31e-25!33;UBERON:0007023!9.04e-25!115;UBERON:0003075!1.18e-24!86;UBERON:0007284!1.18e-24!86;UBERON:0001869!2.32e-23!32;UBERON:0002346!4.18e-23!90;UBERON:0003056!3.10e-20!61;UBERON:0002308!7.65e-19!9;UBERON:0000125!7.65e-19!9;UBERON:0002420!1.60e-18!9;UBERON:0007245!1.60e-18!9;UBERON:0010009!1.60e-18!9;UBERON:0010011!1.60e-18!9;UBERON:0000454!1.60e-18!9;UBERON:0004121!6.72e-18!169;UBERON:0000924!3.40e-17!173;UBERON:0006601!3.40e-17!173;UBERON:0000033!4.07e-16!123;UBERON:0002619!4.87e-15!22;UBERON:0000153!6.70e-15!129;UBERON:0007811!6.70e-15!129;UBERON:0009663!8.90e-15!7;UBERON:0001950!1.71e-14!20;UBERON:0001871!5.19e-13!7;UBERON:0000956!6.70e-13!25;UBERON:0000203!6.70e-13!25;UBERON:0002298!1.25e-09!8;UBERON:0000369!7.31e-09!4;UBERON:0002435!7.31e-09!4;UBERON:0000204!7.31e-09!4;UBERON:0010082!7.31e-09!4;UBERON:0000200!9.34e-09!6;UBERON:0003076!1.92e-08!15;UBERON:0003057!1.92e-08!15;UBERON:0000025!4.99e-08!194;UBERON:0000988!1.13e-07!3;UBERON:0006331!1.30e-07!3;UBERON:0002771!3.02e-07!3;UBERON:0000349!3.98e-07!5;UBERON:0005383!6.02e-07!3;UBERON:0005382!6.02e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!2.84e-37!57;UBERON:0005068!2.84e-37!57;UBERON:0006241!2.84e-37!57;UBERON:0007135!2.84e-37!57;UBERON:0002616!5.16e-33!59;UBERON:0000955!2.23e-32!69;UBERON:0006238!2.23e-32!69;UBERON:0005743!2.80e-31!86;UBERON:0001017!2.90e-31!82;UBERON:0000073!6.09e-31!94;UBERON:0001016!6.09e-31!94;UBERON:0002780!6.43e-31!41;UBERON:0001890!6.43e-31!41;UBERON:0006240!6.43e-31!41;UBERON:0003080!5.18e-30!42;UBERON:0002020!7.27e-27!34;UBERON:0003528!7.27e-27!34;UBERON:0001893!9.02e-27!34;UBERON:0002791!3.31e-25!33;UBERON:0007023!9.04e-25!115;UBERON:0003075!1.18e-24!86;UBERON:0007284!1.18e-24!86;UBERON:0001869!2.32e-23!32;UBERON:0002346!4.18e-23!90;UBERON:0003056!3.10e-20!61;UBERON:0002308!7.65e-19!9;UBERON:0000125!7.65e-19!9;UBERON:0002420!1.60e-18!9;UBERON:0007245!1.60e-18!9;UBERON:0010009!1.60e-18!9;UBERON:0010011!1.60e-18!9;UBERON:0000454!1.60e-18!9;UBERON:0004121!6.72e-18!169;UBERON:0000924!3.40e-17!173;UBERON:0006601!3.40e-17!173;UBERON:0000033!4.07e-16!123;UBERON:0002619!4.87e-15!22;UBERON:0000153!6.70e-15!129;UBERON:0007811!6.70e-15!129;UBERON:0009663!8.90e-15!7;UBERON:0001950!1.71e-14!20;UBERON:0001871!5.19e-13!7;UBERON:0000956!6.70e-13!25;UBERON:0000203!6.70e-13!25;UBERON:0002298!1.25e-09!8;UBERON:0000369!7.31e-09!4;UBERON:0002435!7.31e-09!4;UBERON:0000204!7.31e-09!4;UBERON:0010082!7.31e-09!4;UBERON:0000200!9.34e-09!6;UBERON:0003076!1.92e-08!15;UBERON:0003057!1.92e-08!15;UBERON:0000025!4.99e-08!194;UBERON:0000988!1.13e-07!3;UBERON:0006331!1.30e-07!3;UBERON:0002771!3.02e-07!3;UBERON:0000349!3.98e-07!5;UBERON:0005383!6.02e-07!3;UBERON:0005382!6.02e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;1.32e-11;1!UBERON:0011215;1.32e-11;1!UBERON:0001018;1.32e-11;1!UBERON:0002473;1.32e-11;1!UBERON:0005340;1.32e-11;1!UBERON:0003544;1.32e-11;1!UBERON:0005970;1.32e-11;1!UBERON:0002316;1.32e-11;1!UBERON:0001020;1.32e-11;1!UBERON:0002437;1.32e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.81e-11,1;UBERON:0011215,1.81e-11,1;UBERON:0001018,1.81e-11,1;UBERON:0002473,1.81e-11,1;UBERON:0005340,1.81e-11,1;UBERON:0003544,1.81e-11,1;UBERON:0005970,1.81e-11,1;UBERON:0002316,1.81e-11,1;UBERON:0001020,1.81e-11,1;UBERON:0002437,1.81e-11,1 | |||
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| ||
|short_description=p3@FARP2 | |short_description=p3@FARP2 | ||
}} | }} |
Latest revision as of 10:38, 16 September 2015
Short description: | p3@FARP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FARP2_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_ENST00000471447, ENST00000485051_5end |
EntrezGene: | FARP2 |
HGNC: | 16460 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.11e-52 | 10 |
melanoblast | 6.11e-52 | 10 |
pigment cell | 5.77e-37 | 14 |
light melanocyte | 4.82e-33 | 3 |
neurecto-epithelial cell | 1.03e-25 | 20 |
migratory neural crest cell | 5.82e-19 | 41 |
columnar/cuboidal epithelial cell | 6.81e-19 | 27 |
ecto-epithelial cell | 7.15e-15 | 34 |
Schwann cell | 7.53e-15 | 2 |
neurectodermal cell | 4.98e-13 | 59 |
dark melanocyte | 3.27e-12 | 1 |
ectodermal cell | 1.56e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.81e-11 | 1 |
central nervous system cell part cluster | 1.81e-11 | 1 |
axon tract | 1.81e-11 | 1 |
intercerebral commissure | 1.81e-11 | 1 |
dorsal telencephalic commissure | 1.81e-11 | 1 |
brain white matter | 1.81e-11 | 1 |
brain commissure | 1.81e-11 | 1 |
white matter | 1.81e-11 | 1 |
nervous system commissure | 1.81e-11 | 1 |
cerebral hemisphere white matter | 1.81e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.93e-22 | 2 |