FFCP PHASE1:Hg19::chr9:12698542..12698573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000381142_5end | |association_with_transcript=36bp_to_ENST00000381142_5end | ||
|cluster_id=chr9:12698542..12698573,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_16_at_TYRP1_5end | |description=CAGE_peak_16_at_TYRP1_5end | ||
|id=chr9:12698542..12698573,+ | |id=chr9:12698542..12698573,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.12e-32!10;CL:0000541!1.12e-32!10;CL:0000147!4.16e-23!14;CL:0002567!3.80e-21!3;CL:0000710!6.46e-16!20;CL:0002195!5.10e-14!2;CL:0002571!5.10e-14!2;CL:0000075!1.47e-11!27;CL:0002077!2.71e-09!33;CL:0002566!3.80e-08!1;CL:0002568!5.33e-08!1;CL:0000325!1.01e-07!39;CL:0000333!6.38e-07!41 | |ontology_enrichment_celltype=CL:0000148!1.12e-32!10;CL:0000541!1.12e-32!10;CL:0000147!4.16e-23!14;CL:0002567!3.80e-21!3;CL:0000710!6.46e-16!20;CL:0002195!5.10e-14!2;CL:0002571!5.10e-14!2;CL:0000075!1.47e-11!27;CL:0002077!2.71e-09!33;CL:0002566!3.80e-08!1;CL:0002568!5.33e-08!1;CL:0000325!1.01e-07!39;CL:0000333!6.38e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.74e-88;10!CL:0000147;6.50e-63;14!CL:0002567;8.69e-55;3!CL:0000710;4.88e-44;20!CL:0000075;1.34e-32;27!CL:0002077;8.06e-23;34!CL:0002566;2.47e-19;1!CL:0002568;4.28e-19;1!CL:0000047;3.13e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.74e-88,10;CL:0000541,4.74e-88,10;CL:0000147,6.50e-63,14;CL:0002567,8.69e-55,3;CL:0000710,4.88e-44,20;CL:0000075,1.34e-32,27;CL:0002077,7.34e-26,34;CL:0000333,2.08e-20,41;CL:0002566,2.25e-19,1;CL:0002568,5.62e-19,1;CL:0000133,1.41e-18,59;CL:0000221,3.05e-15,72 | |||
|ontology_enrichment_development_v019=CL:0000133;8.21e-11;59!CL:0000221;9.22e-08;72!UBERON:0003056;3.06e-07;3 | |||
|ontology_enrichment_disease=DOID:1909!9.17e-14!2;DOID:3371!1.26e-07!1;DOID:4549!1.26e-07!1;DOID:5861!1.26e-07!1;DOID:6496!1.26e-07!1;DOID:5662!1.35e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!7.97e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p16@TYRP1 | |short_description=p16@TYRP1 | ||
}} | }} |
Latest revision as of 23:47, 24 September 2015
Short description: | p16@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 36bp_to_ENST00000381142_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.74e-88 | 10 |
melanoblast | 4.74e-88 | 10 |
pigment cell | 6.50e-63 | 14 |
light melanocyte | 8.69e-55 | 3 |
neurecto-epithelial cell | 4.88e-44 | 20 |
columnar/cuboidal epithelial cell | 1.34e-32 | 27 |
ecto-epithelial cell | 7.34e-26 | 34 |
migratory neural crest cell | 2.08e-20 | 41 |
dark melanocyte | 2.25e-19 | 1 |
mesenchymal stem cell of Wharton's jelly | 5.62e-19 | 1 |
neurectodermal cell | 1.41e-18 | 59 |
ectodermal cell | 3.05e-15 | 72 |