FFCP PHASE1:Hg19::chr9:12698593..12698608,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=87bp_to_ENST00000381142_5end | |association_with_transcript=87bp_to_ENST00000381142_5end | ||
|cluster_id=chr9:12698593..12698608,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_20_at_TYRP1_5end | |description=CAGE_peak_20_at_TYRP1_5end | ||
|id=chr9:12698593..12698608,+ | |id=chr9:12698593..12698608,+ | ||
|ontology_enrichment_celltype=CL:0000148!5.28e-40!10;CL:0000541!5.28e-40!10;CL:0000147!2.22e-28!14;CL:0002567!1.71e-25!3;CL:0000710!1.20e-19!20;CL:0002195!5.51e-17!2;CL:0002571!5.51e-17!2;CL:0000075!2.37e-14!27;CL:0002077!1.35e-11!33;CL:0000333!3.42e-11!41;CL:0000325!1.10e-09!39;CL:0002566!1.21e-09!1;CL:0000133!1.44e-07!59 | |ontology_enrichment_celltype=CL:0000148!5.28e-40!10;CL:0000541!5.28e-40!10;CL:0000147!2.22e-28!14;CL:0002567!1.71e-25!3;CL:0000710!1.20e-19!20;CL:0002195!5.51e-17!2;CL:0002571!5.51e-17!2;CL:0000075!2.37e-14!27;CL:0002077!1.35e-11!33;CL:0000333!3.42e-11!41;CL:0000325!1.10e-09!39;CL:0002566!1.21e-09!1;CL:0000133!1.44e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.68e-107;10!CL:0000147;1.45e-76;14!CL:0002567;5.26e-66;3!CL:0000710;1.13e-53;20!CL:0000075;8.35e-40;27!CL:0002077;7.39e-28;34!CL:0002566;3.28e-23;1!CL:0000149;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.33e-107,10;CL:0000541,4.33e-107,10;CL:0000147,1.37e-76,14;CL:0002567,4.71e-66,3;CL:0000710,1.09e-53,20;CL:0000075,8.11e-40,27;CL:0002077,1.21e-31,34;CL:0000333,4.90e-25,41;CL:0002566,3.28e-23,1;CL:0000133,1.20e-17,59;CL:0000221,1.55e-14,72;CL:0000149,6.50e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.27e-09;59!UBERON:0003056;1.51e-08;3!CL:0000221;4.15e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!3.67e-17!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.06e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002146!3.25e-09!1;UBERON:0005623!3.25e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p20@TYRP1 | |short_description=p20@TYRP1 | ||
}} | }} |
Latest revision as of 23:50, 24 September 2015
Short description: | p20@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 87bp_to_ENST00000381142_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.33e-107 | 10 |
melanoblast | 4.33e-107 | 10 |
pigment cell | 1.37e-76 | 14 |
light melanocyte | 4.71e-66 | 3 |
neurecto-epithelial cell | 1.09e-53 | 20 |
columnar/cuboidal epithelial cell | 8.11e-40 | 27 |
ecto-epithelial cell | 1.21e-31 | 34 |
migratory neural crest cell | 4.90e-25 | 41 |
dark melanocyte | 3.28e-23 | 1 |
neurectodermal cell | 1.20e-17 | 59 |
ectodermal cell | 1.55e-14 | 72 |
visual pigment cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.24e-12 | 2 |