FFCP PHASE1:Hg19::chr2:43616357..43616368,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:43616357..43616368,- | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr2:43616357..43616368,- | |description=CAGE_peak_at_chr2:43616357..43616368,- | ||
|id=chr2:43616357..43616368,- | |id=chr2:43616357..43616368,- | ||
|ontology_enrichment_celltype=CL:0002563!2.26e-16!4;CL:0002253!6.94e-09!2 | |ontology_enrichment_celltype=CL:0002563!2.26e-16!4;CL:0002253!6.94e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002231;4.09e-23;3!CL:0002563;7.35e-18;4!CL:0002076;9.99e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,4.09e-23,3;CL:0002563,7.35e-18,4;CL:0002076,2.10e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!3.71e-09!2 | |ontology_enrichment_disease=DOID:3493!3.71e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.04e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.04e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0001242!2.26e-16!4;UBERON:0001262!2.26e-16!4;UBERON:0004786!2.26e-16!4;UBERON:0004808!2.26e-16!4;UBERON:0001277!2.26e-16!4;UBERON:0003350!2.68e-13!5;UBERON:0003929!5.65e-10!54;UBERON:0001046!7.63e-08!19;UBERON:0000485!8.60e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;7.35e-18;4!UBERON:0001262;7.35e-18;4!UBERON:0004786;7.35e-18;4!UBERON:0004808;7.35e-18;4!UBERON:0001277;7.35e-18;4!UBERON:0000485;8.16e-11;7!UBERON:0003929;8.16e-11;7!UBERON:0003350;1.24e-09;8!UBERON:0002367;2.63e-07;11!UBERON:0010147;2.63e-07;11!UBERON:0003937;8.38e-07;12!UBERON:0005399;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,7.35e-18,4;UBERON:0001262,7.35e-18,4;UBERON:0004786,7.35e-18,4;UBERON:0004808,7.35e-18,4;UBERON:0001277,7.35e-18,4;UBERON:0003350,1.24e-09,8;UBERON:0000485,1.04e-08,9;UBERON:0002367,2.63e-07,11;UBERON:0010147,2.63e-07,11;UBERON:0009846,2.63e-07,11;UBERON:0003353,2.63e-07,11;UBERON:0004902,2.63e-07,11;UBERON:0003820,2.63e-07,11;UBERON:0009847,2.63e-07,11;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12 | |||
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|short_description=p@chr2:43616357..43616368,- | |short_description=p@chr2:43616357..43616368,- | ||
}} | }} |
Latest revision as of 10:17, 29 July 2015
Short description: | p@chr2:43616357..43616368, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43616357..43616368, - |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 4.09e-23 | 3 |
intestinal epithelial cell | 7.35e-18 | 4 |
endo-epithelial cell | 2.10e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 7.35e-18 | 4 |
wall of intestine | 7.35e-18 | 4 |
gastrointestinal system mucosa | 7.35e-18 | 4 |
gastrointestinal system epithelium | 7.35e-18 | 4 |
intestinal epithelium | 7.35e-18 | 4 |
epithelium of mucosa | 1.24e-09 | 8 |
simple columnar epithelium | 1.04e-08 | 9 |
prostate gland | 2.63e-07 | 11 |
male accessory sex gland | 2.63e-07 | 11 |
embryonic cloacal epithelium | 2.63e-07 | 11 |
epithelium of hindgut | 2.63e-07 | 11 |
urogenital sinus epithelium | 2.63e-07 | 11 |
prostate bud | 2.63e-07 | 11 |
prostate field | 2.63e-07 | 11 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.04e-34 | 2 |