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FFCP PHASE1:Hg19::chr2:48010312..48010328,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=2956
|EntrezGene=2956
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=7329
|HGNC=7329
|TSSclassifier=strong
|UniProt=B4DF41
|UniProt=B4DF41
|association_with_transcript=0bp_to_ENST00000540021,uc010yoi.1_5end
|association_with_transcript=0bp_to_ENST00000540021,uc010yoi.1_5end
|cluster_id=chr2:48010312..48010328,+
|coexpression_cluster_id=C4236
|description=CAGE_peak_2_at_MSH6_5end
|description=CAGE_peak_2_at_MSH6_5end
|id=chr2:48010312..48010328,+
|id=chr2:48010312..48010328,+
|ontology_enrichment_celltype=CL:0000066!1.31e-08!254
|ontology_enrichment_celltype=CL:0000066!1.31e-08!254
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=CL:0000066,8.97e-09,253
|ontology_enrichment_development_v019=UBERON:0008947;5.80e-07;29
|ontology_enrichment_disease=DOID:162!4.84e-52!235;DOID:14566!8.80e-51!239;DOID:0050687!9.86e-35!143;DOID:305!7.89e-28!106;DOID:0050686!1.63e-21!137;DOID:2531!1.36e-09!51;DOID:0060083!1.36e-09!51;DOID:1240!1.02e-07!39;DOID:3095!1.28e-07!22;DOID:2994!1.28e-07!22;DOID:8692!2.82e-07!31;DOID:7!7.32e-07!39
|ontology_enrichment_disease=DOID:162!4.84e-52!235;DOID:14566!8.80e-51!239;DOID:0050687!9.86e-35!143;DOID:305!7.89e-28!106;DOID:0050686!1.63e-21!137;DOID:2531!1.36e-09!51;DOID:0060083!1.36e-09!51;DOID:1240!1.02e-07!39;DOID:3095!1.28e-07!22;DOID:2994!1.28e-07!22;DOID:8692!2.82e-07!31;DOID:7!7.32e-07!39
|ontology_enrichment_disease_v019=DOID:305;6.95e-09;106!DOID:0050687;4.78e-08;143!DOID:3095;9.64e-08;22!DOID:2994;9.64e-08;22!DOID:14566;3.08e-07;239!DOID:8692;4.41e-07;31
|ontology_enrichment_disease_v019_2=DOID:162,4.81e-52,235;DOID:14566,8.76e-51,239;DOID:0050687,9.82e-35,143;DOID:305,7.87e-28,106;DOID:0050686,1.63e-21,137;DOID:2531,1.36e-09,51;DOID:0060083,1.36e-09,51;DOID:1240,1.02e-07,39;DOID:3095,1.28e-07,22;DOID:2994,1.28e-07,22;DOID:8692,2.81e-07,31;DOID:7,7.32e-07,39
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
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|short_description=p2@MSH6
|short_description=p2@MSH6
}}
}}

Latest revision as of 12:26, 17 September 2015

Short description:p2@MSH6
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_MSH6_5end
Coexpression cluster:C4236_retinoblastoma_iPS_small_testicular_HES3GFP_teratocarcinoma_rhabdomyosarcoma
Association with transcript: 0bp_to_ENST00000540021, uc010yoi.1_5end
EntrezGene:MSH6
HGNC: 7329
UniProt: B4DF41
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data