FFCP PHASE1:Hg19::chr9:35732592..35732640,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10488 | |EntrezGene=10488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2347 | |HGNC=2347 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486056_5end | |association_with_transcript=0bp_to_ENST00000486056_5end | ||
|cluster_id=chr9:35732592..35732640,+ | |||
|description=CAGE_peak_1_at_CREB3_5end | |description=CAGE_peak_1_at_CREB3_5end | ||
|id=chr9:35732592..35732640,+ | |id=chr9:35732592..35732640,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.77e-26!180;CL:0000220!3.17e-22!246;CL:0000183!6.12e-22!59;CL:0000192!1.34e-21!42;CL:0000514!1.34e-21!42;CL:0002321!1.64e-21!248;CL:0000680!9.87e-21!57;CL:0000056!9.87e-21!57;CL:0000355!9.87e-21!57;CL:0000222!2.65e-20!119;CL:0000187!1.07e-19!54;CL:0000359!5.91e-18!32;CL:0000393!1.41e-17!60;CL:0000211!1.41e-17!60;CL:0002371!1.24e-11!591;CL:0000057!6.32e-10!75;CL:0000144!1.58e-09!625;CL:0000548!1.31e-07!679;CL:0000004!1.31e-07!679;CL:0000255!1.31e-07!679;CL:0000012!3.18e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.77e-26!180;CL:0000220!3.17e-22!246;CL:0000183!6.12e-22!59;CL:0000192!1.34e-21!42;CL:0000514!1.34e-21!42;CL:0002321!1.64e-21!248;CL:0000680!9.87e-21!57;CL:0000056!9.87e-21!57;CL:0000355!9.87e-21!57;CL:0000222!2.65e-20!119;CL:0000187!1.07e-19!54;CL:0000359!5.91e-18!32;CL:0000393!1.41e-17!60;CL:0000211!1.41e-17!60;CL:0002371!1.24e-11!591;CL:0000057!6.32e-10!75;CL:0000144!1.58e-09!625;CL:0000548!1.31e-07!679;CL:0000004!1.31e-07!679;CL:0000255!1.31e-07!679;CL:0000012!3.18e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.38e-17;32!CL:0000192;1.60e-15;43!CL:0000187;1.02e-10;55!CL:0000134;6.74e-10;55!CL:0000393;4.88e-09;61!CL:0000211;4.88e-09;61!CL:0000723;1.10e-08;61!CL:0000048;1.40e-08;58!CL:0000349;2.25e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.75e-22,250;CL:0000192,1.14e-21,43;CL:0000514,1.14e-21,43;CL:0000680,7.38e-21,58;CL:0000056,7.38e-21,58;CL:0000355,7.38e-21,58;CL:0000222,9.61e-21,121;CL:0000187,8.01e-20,55;CL:0000359,5.91e-18,32;CL:0000393,1.01e-17,61;CL:0000211,1.01e-17,61;CL:0000057,4.43e-10,76;CL:0000349,2.18e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.60e-15;43!CL:0000355;6.79e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.36e-22!83;UBERON:0002329!9.36e-22!83;UBERON:0003077!9.36e-22!83;UBERON:0003059!9.36e-22!83;UBERON:0007282!9.36e-22!83;UBERON:0009618!9.36e-22!83;UBERON:0007285!9.36e-22!83;UBERON:0005256!1.99e-21!143;UBERON:0000119!1.59e-20!312;UBERON:0000483!1.69e-20!309;UBERON:0004290!7.81e-20!70;UBERON:0000486!8.53e-20!82;UBERON:0000475!1.23e-19!365;UBERON:0000481!1.04e-18!347;UBERON:0002049!1.17e-18!79;UBERON:0007798!1.17e-18!79;UBERON:0003914!2.16e-18!118;UBERON:0000468!2.34e-18!659;UBERON:0001134!2.70e-18!61;UBERON:0002036!2.70e-18!61;UBERON:0003082!2.70e-18!61;UBERON:0000467!3.63e-18!625;UBERON:0000480!3.71e-18!626;UBERON:0002385!6.06e-18!63;UBERON:0001015!6.06e-18!63;UBERON:0000383!6.06e-18!63;UBERON:0004872!2.03e-17!84;UBERON:0000490!3.67e-17!138;UBERON:0001637!5.32e-17!42;UBERON:0003509!5.32e-17!42;UBERON:0004572!5.32e-17!42;UBERON:0002100!6.08e-17!216;UBERON:0001981!1.88e-16!60;UBERON:0007500!1.88e-16!60;UBERON:0004537!1.88e-16!60;UBERON:0006965!1.88e-16!60;UBERON:0000055!3.90e-16!69;UBERON:0000477!3.99e-16!286;UBERON:0004111!1.33e-15!241;UBERON:0002050!7.06e-14!605;UBERON:0005423!7.06e-14!605;UBERON:0000923!8.04e-14!604;UBERON:0005291!8.04e-14!604;UBERON:0006598!8.04e-14!604;UBERON:0002532!8.04e-14!604;UBERON:0004573!2.35e-13!33;UBERON:0004571!2.35e-13!33;UBERON:0000025!3.33e-13!194;UBERON:0003104!4.04e-13!238;UBERON:0009142!4.04e-13!238;UBERON:0000922!5.91e-13!612;UBERON:0001009!1.30e-11!113;UBERON:0004535!1.43e-11!110;UBERON:0000926!5.31e-09!448;UBERON:0004120!5.31e-09!448;UBERON:0006603!5.31e-09!448;UBERON:0000064!3.73e-08!219;UBERON:0000062!8.00e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.91e-12;33!UBERON:0004571;5.91e-12;33!UBERON:0001637;7.36e-12;42!UBERON:0003509;7.36e-12;42!UBERON:0004572;7.36e-12;42!UBERON:0007500;3.93e-10;56!UBERON:0001981;3.93e-10;56!UBERON:0004537;3.93e-10;56!UBERON:0003914;3.30e-09;74!UBERON:0002049;2.06e-08;75!UBERON:0007798;2.06e-08;75!UBERON:0000055;7.21e-08;65 | |||
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|short_description=p1@CREB3 | |short_description=p1@CREB3 | ||
}} | }} |
Latest revision as of 08:44, 17 September 2015
Short description: | p1@CREB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CREB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000486056_5end |
EntrezGene: | CREB3 |
HGNC: | 2347 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.75e-22 | 250 |
smooth muscle cell | 1.14e-21 | 43 |
smooth muscle myoblast | 1.14e-21 | 43 |
muscle precursor cell | 7.38e-21 | 58 |
myoblast | 7.38e-21 | 58 |
multi-potent skeletal muscle stem cell | 7.38e-21 | 58 |
mesodermal cell | 9.61e-21 | 121 |
muscle cell | 8.01e-20 | 55 |
vascular associated smooth muscle cell | 5.91e-18 | 32 |
electrically responsive cell | 1.01e-17 | 61 |
electrically active cell | 1.01e-17 | 61 |
fibroblast | 4.43e-10 | 76 |
extraembryonic cell | 2.18e-07 | 19 |